Return to main results Retrieve Phyre Job Id

Job DescriptionP0AEZ7
Confidence100.00%DateThu Jan 5 11:24:42 GMT 2012
Rank2Aligned Residues160
% Identity18%Templatec2y8pA_
PDB info PDB header:lyaseChain: A: PDB Molecule:endo-type membrane-bound lytic murein transglycosylase a; PDBTitle: crystal structure of an outer membrane-anchored endolytic2 peptidoglycan lytic transglycosylase (mlte) from3 escherichia coli
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   84.....90.........100.........110.........120 .........130.........140......... 150.......
Predicted Secondary structure 






.













.....




Query SS confidence 




































.




























. . . . .







Query Sequence  YLRNKSYLHDVTLRAEPYMYWIAGQVKKRNMPMELVL. LPIVESAFDPHATSGANAAGIWQIIPSTG. . . . . RNYGLKQT
Query Conservation               
   
   
        

  
  .
   

 
 
 
 
  

 

 
 

 

.....   
    
Alig confidence 




































.




























.....







Template Conservation 
            
   
   
   
   

   

 


  

 
 
 
 
  

 






 

        
    
Template Sequence  YTNPPWNAKVPVQRAMQWMPISQKAGAAWGVDPQLITAIIAIESGGNPNAVSKSNAIGLMQLKASTSGRDVYRRMGWSGE
Template Known Secondary structure  TT
S



TTT

TTT
TT
B
TT

BTTTTB
TTTT
SS
Template Predicted Secondary structure 































Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90.........100.
 
   158.160.........170.........180.... .....190.........200.........210...... ...220
Predicted Secondary structure 







.......










..........

Query SS confidence 


























. . . . . . .































. . . . . . . . . .



Query Sequence  RNYDARRDVVASTTAALNMMQRLNKMF. . . . . . . DGDWLLTVAAYNSGEGRVMKAIKTNKARGKST. . . . . . . . . . DFWS
Query Conservation     
 
 
      

  

  
   
....... 
 
 






 
 
 
   
          ..........
   
Alig confidence 


























.......































..........



Template Conservation       
 

  

  
  

  
                 





 
 
 
 
                          
Template Sequence  PTTSELKNPERNISMGAAYLNILETGPLAGIEDPKVLQYALVVSYANGAGALLRTFSSDRKKAISKINDLDADEFLEHVA
Template Known Secondary structure 

STTTTT



TT
SSTS
Template Predicted Secondary structure 























Template SS confidence 















































































   102.......110.........120.........130.........140.........150.........160.........170.........180.
 
   221... .....230.........240...
Predicted Secondary structure 



.
Query SS confidence 



.


















Query Sequence  LPLP. QETKQYVPKMLALSDILKN
Query Conservation    
 . 

  

   

   
   
Alig confidence 



.


















Template Conservation     
  


 

 

   
  
  
Template Sequence  RNHPAPQAPRYIYKLEQALDAMLE
Template Known Secondary structure 
S
TTT
Template Predicted Secondary structure 

Template SS confidence 























   182.......190.........200.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions