Job Description P07649 Confidence 5.26% Date Thu Jan 5 11:00:26 GMT 2012 Rank 38 Aligned Residues 73 % Identity 14% Template d1iwga1 SCOP info Ferredoxin-like Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains Resolution 3.50

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.
Query SS confidence																																																																								.	.	.
Query Sequence		S	K	Y	Y	G	W	Q	R	Q	N	E	V	R	S	V	Q	E	K	L	E	K	A	L	S	Q	V	A	N	E	P	I	T	V	F	C	A	G	R	T	D	A	G	V	H	G	T	G	Q	V	V	H	F	E	T	T	A	L	R	K	D	A	A	W	T	L	G	V	N	A	N	.	.	.	L	P	G	D	I
Query Conservation																																																																								.	.	.
Alig confidence																																.										.																														.	.	.
Template Conservation																																.										.
Template Sequence		A	S	Y	P	G	A	D	A	K	T	V	Q	D	T	V	T	Q	V	I	E	Q	N	M	N	G	I	D	N	L	M	.	Y	M	S	S	N	S	D	S	T	.	G	T	V	Q	I	T	L	T	F	E	S	G	T	D	A	D	I	A	Q	V	Q	V	Q	N	K	L	Q	L	A	M	P	L	L	P	Q	E	V
Template Known Secondary structure					T	T								T	T	T												S	S			.								T	T	.	T										T	T											T	T	S	G	G	G	T	G	G	G	S
Template Predicted Secondary structure																																.										.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.		.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions