Job Description P07649 Confidence 100.00% Date Thu Jan 5 11:00:26 GMT 2012 Rank 1 Aligned Residues 264 % Identity 100% Template d1dj0a_ SCOP info Pseudouridine synthase Pseudouridine synthase Pseudouridine synthase I TruA Resolution 1.50

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	V	Y	K	I	A	L	G	I	E	Y	D	G	S	K	Y	Y	G	W	Q	R	Q	N	E	V	R	S	V	Q	E	K	L	E	K	A	L	S	Q	V	A	N	E	P	I	T	V	F	C	A	G	R	T	D	A	G	V	H	G	T	G	Q	V	V	H	F	E	T	T	A	L	R	K	D	A	A	W	T	L	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	P	V	Y	K	I	A	L	G	I	E	Y	D	G	S	K	Y	Y	G	W	Q	R	Q	N	E	V	R	S	V	Q	E	K	L	E	K	A	L	S	Q	V	A	N	E	P	I	T	V	F	C	A	G	R	T	D	A	G	V	H	G	T	G	Q	V	V	H	F	E	T	T	A	L	R	K	D	A	A	W	T	L	G
Template Known Secondary structure																T	T	S	S		S			T	T		S	S															T	S							S	S				T	T													S
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	N	L	P	G	D	I	A	V	R	W	V	K	T	V	P	D	D	F	H	A	R	F	S	A	T	A	R	R	Y	R	Y	I	I	Y	N	H	R	L	R	P	A	V	L	S	K	G	V	T	H	F	Y	E	P	L	D	A	E	R	M	H	R	A	A	Q	C	L	L	G	E	N	D	F	T	S	F	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	A	N	L	P	G	D	I	A	V	R	W	V	K	T	V	P	D	D	F	H	A	R	F	S	A	T	A	R	R	Y	R	Y	I	I	Y	N	H	R	L	R	P	A	V	L	S	K	G	V	T	H	F	Y	E	P	L	D	A	E	R	M	H	R	A	A	Q	C	L	L	G	E	N	D	F	T	S	F	R	A
Template Known Secondary structure					T	S		T	T											T	T			T	T	T	T													S	S	S				T	T	T	T	S	S					S												G	G	G							G	G	G
Template Predicted Secondary structure
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	Q	C	Q	S	R	T	P	W	R	N	V	M	H	I	N	V	T	R	H	G	P	Y	V	V	V	D	I	K	A	N	A	F	V	H	H	M	V	R	N	I	V	G	S	L	M	E	V	G	A	H	N	Q	P	E	S	W	I	A	E	L	L	A	A	K	D	R	T	L	A	A	A	T	A	K	A	E	G	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Q	C	Q	S	R	T	P	W	R	N	V	M	H	I	N	V	T	R	H	G	P	Y	V	V	V	D	I	K	A	N	A	F	V	H	H	M	V	R	N	I	V	G	S	L	M	E	V	G	A	H	N	Q	P	E	S	W	I	A	E	L	L	A	A	K	D	R	T	L	A	A	A	T	A	K	A	E	G	L	Y
Template Known Secondary structure		T	T				S															T	T									S				T	T														T	T	S	S		T	T											G	G	G	S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	A	V	D	Y	P	D	R	Y	D	L	P	K	P	P	M	G	P	L	F	L	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	V	A	V	D	Y	P	D	R	Y	D	L	P	K	P	P	M	G	P	L	F	L	A	D
Template Known Secondary structure									G	G	G									S	T	T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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