Job Description P07649 Confidence 91.60% Date Thu Jan 5 11:00:26 GMT 2012 Rank 3 Aligned Residues 148 % Identity 17% Template c2v9kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:uncharacterized protein flj32312; PDBTitle: crystal structure of human pus10, a novel pseudouridine2 synthase. Resolution 2.0 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.		.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.					.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																	.																					.	.	.	.											.	.	.	.	.
Query SS confidence																	.																					.	.	.	.											.	.	.	.	.
Query Sequence		S	V	Q	E	K	L	E	K	A	L	S	Q	V	A	N	.	E	P	I	T	V	F	C	A	G	R	T	D	A	G	V	H	G	T	G	Q	.	.	.	.	V	V	H	F	E	T	T	A	L	R	.	.	.	.	.	K	D	A	A	W	T	L	G	V	N	A	N	L	P	G	D	I	A	V	R	W	V	K	T	V
Query Conservation																	.																					.	.	.	.											.	.	.	.	.
Alig confidence																	.																					.	.	.	.											.	.	.	.	.												.
Template Conservation																																																																				.
Template Sequence		S	V	E	E	L	I	S	D	H	L	L	A	V	F	K	A	E	S	F	N	F	S	S	S	G	R	E	D	V	D	V	R	T	L	G	N	G	R	P	F	A	I	E	L	V	N	P	H	R	V	H	F	T	S	Q	E	I	K	E	L	Q	Q	K	I	N	N	.	S	S	N	K	I	Q	V	R	D	L	Q	L	V
Template Known Secondary structure									T	T						T		S							S	S				T	T																S		S																		T	.	T		S	S
Template Predicted Secondary structure																																																																				.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.		.	.	.	.	.	.	.	390	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.					.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.			160	.	.	.	.	.	.		.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.																																													.	.								.
Query SS confidence														.	.	.	.																																													.	.								.
Query Sequence		P	D	D	F	H	A	R	F	S	A	T	A	.	.	.	.	R	R	Y	R	Y	I	I	Y	N	H	R	L	R	P	A	V	L	S	K	G	V	T	H	F	Y	E	P	L	D	A	E	R	M	H	R	A	A	Q	C	L	L	G	E	N	.	.	D	F	T	S	F	R	A	.	V	Q	C	Q	S	R	T	P	W	R
Query Conservation														.	.	.	.																																													.	.								.
Alig confidence														.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.										.	.								.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		T	R	E	A	I	G	H	M	K	E	G	E	E	E	K	T	K	T	Y	S	A	L	I	W	T	N	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	I	Q	K	K	D	I	E	.	F	L	N	D	I	K	D	L	K	I	D	Q	K	T	P	L	R	V	L	H	R	R	P	L	A	V	R	A	R
Template Known Secondary structure			T																								S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								G	.	G	G	G	G			S									G	G	G	T	T	T	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		396	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.																.	.	.	.	.	.	.	430		.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		177	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure											.
Query SS confidence											.
Query Sequence		N	V	M	H	I	N	V	T	R	.	H	G	P	Y	V	V	V	D	I	K	A	N	A
Query Conservation											.
Alig confidence											.
Template Conservation
Template Sequence		V	I	H	F	M	E	T	Q	Y	V	D	E	H	H	F	R	L	H	L	K	T	Q	A
Template Known Secondary structure													T	T										T
Template Predicted Secondary structure
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions