Phyre 2 alignment of P37749 with d1f6da

Job Description P37749
Confidence 99.84% Date Thu Jan 5 11:57:25 GMT 2012

Rank 24 Aligned Residues 301

% Identity 11% Template d1f6da_

SCOP info UDP-Glycosyltransferase/glycogen phosphorylase UDP-Glycosyltransferase/glycogen phosphorylase UDP-N-acetylglucosamine 2-epimerase

Resolution 2.50

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	G	F	K	A	R	K	D	A	L	D	I	A	S	D	Y	E	N	I	S	V	V	N	I	P	L	W	G	G	V	V	Q	R	I	I	S	S	V	K	L	S	T	F	L	C	G	L	E	N	K	D	V	L	I	F	N	F	P	M	A	K	P	F	W	H	I	L	S	F	F	H	R	L	L	K	F	R	I	V	P	L
Query Conservation
Alig confidence																																																													.	.
Template Conservation																																																													.	.
Template Sequence	H	R	E	X	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	X	Q	P	G	Q	G	L	T	E	I	T	C	R	I	L	E	G	L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	.	.	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V
Template Known Secondary structure	T	G	G	G	G							T	T				S							S	S	S	S																							S						T	T				.	.										T	T	T
Template Predicted Secondary structure																																																													.	.
Template SS confidence
	39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

	95	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																				.	.	.	.	150
Predicted Secondary structure								.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	I	H	D	I	D	E	L	.	.	.	.	.	R	G	G	G	G	S	D	S	V	R	L	A	T	C	D	M	V	I	S	H	N	P	Q	M	T	K	Y	L	S	K	Y	M	S	Q	D	K	I	K	D	I	K	I	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	V	S	S
Query Conservation								.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	X	Y	H	F	S	P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	X	S	S	D	K	L	R	S	E	L	A	A
Template Known Secondary structure	S						S		T	T	S	S	T	T											T		S					S	S										T	T			G	G	G																			T	T	T										T
Template Predicted Secondary structure
Template SS confidence
	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.

	151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.										.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.	.	.
Query Sequence	D	V	E	H	R	D	V	T	D	K	Q	R	G	V	I	Y	A	G	N	L	S	R	H	K	C	S	F	I	Y	T	E	G	C	D	.	.	.	.	.	.	.	.	.	F	T	L	F	G	V	N	Y	E	N	K	D	N	P	K	Y	L	G	S	F	D	A	Q	S	P	E	K	I	N	L	P	G	M	Q	F	G	L
Query Conservation																																			.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	N	Y	P	F	I	D	P	D	K	K	X	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F	E	E	I	C	H	A	L	A	D	I	A	T	T	H	Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F
Template Known Secondary structure	T		T	T			T	T	S										B	S	S																				T	T									B													T	T		T	T
Template Predicted Secondary structure
Template SS confidence
	197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

	222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																																											.
Query SS confidence																																																											.
Query Sequence	I	W	D	G	D	S	V	E	T	C	S	G	A	F	G	D	Y	L	K	F	N	N	P	H	K	T	S	L	Y	L	S	M	E	L	P	V	F	I	W	D	K	A	A	L	A	D	F	I	V	D	N	R	I	G	Y	A	V	G	.	S	I	K	E	M	Q	E	I	V	D	S	M	T	I	E	T	Y	K	Q	I	S
Query Conservation																																																											.
Alig confidence		.	.	.														.	.	.	.	.																																					.																	.	.
Template Conservation		.	.	.														.	.	.	.	.																																																						.	.
Template Sequence	V	.	.	.	W	L	X	N	H	A	W	L	I	L	T	D	S	.	.	.	.	.	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	X	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	R	L	V	G	T	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	.	.	N	E	Y
Template Known Secondary structure		.	.	.							S					S	S	.	.	.	.	.	S	G	G	G	G	T	G	G	G	G	T							S	S			S								T	S						S	S																.	.
Template Predicted Secondary structure		.	.	.														.	.	.	.	.																																																						.	.
Template SS confidence
	277				.	.	280	.	.	.	.	.	.	.	.	.	290						.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.

	301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	E	N	T	K	I	I	S	Q	K	I	R	T	G	S	Y	F	R	D	V	L	E	E	V	I	D	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	Q	A	X	S	R	A	H	N	P	Y	G	D	G	Q	A	C	S	R	I	L	E	A	L	K	N	N	R
Template Known Secondary structure						S			T	T			S													T
Template Predicted Secondary structure
Template SS confidence
	347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.

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No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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