Job Description P37749 Confidence 99.96% Date Thu Jan 5 11:57:25 GMT 2012 Rank 7 Aligned Residues 284 % Identity 15% Template c2x6rA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:trehalose-synthase tret; PDBTitle: crystal structure of trehalose synthase tret from p.2 horikoshi produced by soaking in trehalose Resolution 2.20 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	L	W	G	G	V	V	Q	R	I	I	S	S	V	K	L	S	T	F	L	C	G	L	E	N	K	D	V	L	I	F	N	F	P	M	A	K	P	F	W	H	I	L	S	F	F	H	R	L	L	K	F	R	I	V	P	L	I	H	D	I	D	E	L	R	G	G	G	G	S	D	S	V	R	L	A	T	C	D
Query Conservation
Alig confidence																																									.	.	.
Template Conservation																																									.	.	.
Template Sequence		L	K	L	T	E	E	M	K	E	L	Y	L	N	V	N	R	E	N	S	K	F	I	D	L	S	S	F	D	Y	V	L	V	H	D	P	Q	P	A	A	.	.	.	L	I	E	F	Y	E	K	K	S	P	W	L	W	R	C	H	I	D	L	S	S	P	N	R	E	F	W	E	F	L	R	R	F	V	E	K	Y	D
Template Known Secondary structure																				T	T	S	S		G	G	G	S	S						S	S	T	T	G	G	.	.	.	G	G	G	G	S				S								S			S	S														T	T	S	S
Template Predicted Secondary structure																																									.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.													.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																																									.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query SS confidence																																									.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Query Sequence		M	V	I	S	H	N	P	Q	M	T	K	Y	L	S	K	Y	M	S	Q	D	K	I	K	D	I	K	I	F	D	Y	L	V	S	S	D	V	E	H	R	.	.	.	.	.	.	.	.	.	.	.	.	D	V	T	D	K	Q	R	G	V	I	Y	A	G	N	L	S	R	H	K	C	S	F	I	Y	T	.	.	.	.
Query Conservation																																									.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Alig confidence									.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation									.	.	.
Template Sequence		R	Y	I	F	H	L	P	.	.	.	E	Y	V	Q	P	E	L	D	R	N	K	A	V	I	M	P	P	S	I	D	P	L	S	E	K	N	V	E	L	K	Q	T	E	I	L	R	I	L	E	R	F	D	V	D	P	E	K	P	I	I	T	Q	V	S	R	F	D	P	W	K	G	I	F	D	V	I	E	I	Y	R
Template Known Secondary structure						S	S	G	.	.	.	G	G	S		T	T	S		T	T	T								B		T	T	S	T	T	T	S														T	T			T	T	S										S	T	T	S
Template Predicted Secondary structure									.	.	.
Template SS confidence
		178	.	180	.	.	.	.				.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
								181	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.															.	.	.	.	.
Query SS confidence		.	.	.	.	.	.															.	.	.	.	.
Query Sequence		.	.	.	.	.	.	E	G	C	D	F	T	L	F	G	V	N	Y	E	N	.	.	.	.	.	K	D	N	P	K	Y	L	G	S	F	D	A	Q	S	P	E	K	I	N	L	P	G	M	Q	F	G	L	I	W	D	G	D	S	V	E	T	C	S	G	A	F	G	D	Y	L	K	F	N	N	P	H	K	T	S	L
Query Conservation		.	.	.	.	.	.															.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.	.	.
Template Conservation
Template Sequence		K	V	K	E	K	I	P	G	V	Q	L	L	L	V	G	V	M	A	H	D	D	P	E	G	W	I	Y	F	E	K	T	L	R	K	I	G	E	D	Y	D	V	K	V	L	T	N	L	I	G	V	H	A	R	E	V	N	A	F	Q	R	A	S	D	V	I	L	Q	M	S	I	R	E	G	F	G	L	T	V	T	E
Template Known Secondary structure					T	T		T	T											T	T																T	T		T	T						G	G	G	T														S							S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.
Predicted Secondary structure																																																.	.
Query SS confidence																																																.	.
Query Sequence		Y	L	S	M	E	L	P	V	F	I	W	D	K	A	A	L	A	D	F	I	V	D	N	R	I	G	Y	A	V	G	S	I	K	E	M	Q	E	I	V	D	S	M	T	I	E	T	.	.	Y	K	Q	I	S	E	N	T	K	I	I	S	Q	K	I	R	T	G	S	Y	F	R	D	V	L	E	E	V	I	D	D	L
Query Conservation																																																.	.
Alig confidence																																																.	.															.	.	.
Template Conservation																																																																.	.	.
Template Sequence		A	M	W	K	G	K	P	V	I	G	R	A	V	G	G	I	K	F	Q	I	V	D	G	E	T	G	F	L	V	R	D	A	N	E	A	V	E	V	V	L	Y	L	L	K	H	P	E	V	S	K	E	M	G	A	K	A	K	E	R	V	R	K	.	.	.	N	F	I	I	T	K	H	M	E	R	Y	L	D	I	L
Template Known Secondary structure					T	T							S										B	T	T	T					S	S																																.	.	.		T	B
Template Predicted Secondary structure																																																																.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.				.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		328	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	S
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		412	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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