Job Description P37749 Confidence 99.97% Date Thu Jan 5 11:57:25 GMT 2012 Rank 4 Aligned Residues 286 % Identity 12% Template c2r60A_ PDB info PDB header:transferase Chain: A: PDB Molecule:glycosyl transferase, group 1; PDBTitle: structure of apo sucrose phosphate synthase (sps) of2 halothermothrix orenii Resolution 1.80 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	L	W	G	G	V	V	Q	R	I	I	S	S	V	K	L	S	T	F	L	C	G	L	E	N	K	D	V	L	I	F	N	F	P	M	A	K	P	F	W	H	I	L	S	F	F	H	R	L	L	K	F	R	I	V	P	L	I	H	D	I	D	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.
Template Sequence		K	E	E	L	W	P	Y	L	H	E	Y	V	N	K	I	I	N	F	Y	R	E	E	G	K	F	P	Q	V	V	T	T	H	Y	.	.	.	G	D	G	G	L	A	G	V	L	L	K	N	I	K	G	L	P	F	T	F	T	G	H	S	L	G	A	Q	K	M	E	K	L	N	V	N	T	S	N	F	K	E	M	D
Template Known Secondary structure		G	G	G		G	G	G																T				S							.	.	.																							S	S								T	T				S	T	T	S
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
						101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.										.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure		.	.	.	.																																		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	L	R	G	G	G	G	S	D	S	V	R	L	A	T	C	D	M	V	I	S	H	N	P	Q	M	T	K	Y	L	S	K	Y	M	.	.	.	.	.	.	.	.	.	S	Q	D	K	I	K	D	I	K	I	F	D	Y	L	V	S	S	D	V	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	R	F	K	F	H	R	R	I	I	A	E	R	L	T	M	S	Y	A	D	K	I	I	V	S	T	S	Q	E	R	F	G	Q	Y	S	H	D	L	Y	R	G	A	V	N	V	E	D	D	D	K	F	S	V	I	P	P	G	V	N	T	R	V	F	D	G	E	Y	G	D	K	I	K	A	K	I	T	K	Y	L	E
Template Known Secondary structure																					S					S	S							T	T	T	S	G	G	G	T	T	T			T	T		G	G	G								B		T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
				154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.											.	.	.	.	.	.	.	.	190	.	.	.	.																	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.																													.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																													.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	H	R	D	V	T	D	K	Q	R	G	V	I	Y	A	G	N	L	S	R	H	K	C	S	F	I	Y	T	E	.	.	.	.	.	.	.	.	.	.	G	C	D	F	T	L	F	G	V	N	Y	E	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	N	P	K	Y	L	G	S	F	D
Query Conservation		.	.																													.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																													.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	D	L	G	S	E	R	M	E	L	P	A	I	I	A	S	S	R	L	D	Q	K	K	N	H	Y	G	L	V	E	A	Y	V	Q	N	K	E	L	Q	D	K	A	N	L	V	L	T	L	R	G	I	E	N	P	F	E	D	Y	S	R	A	G	Q	E	E	K	E	I	L	G	K	I	I	E	L	I	D	N	N	D
Template Known Secondary structure				S		G	G	G	T	T	S							S				G	G	G											T															S	S		S	B	T	T	T	B		T	T	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.			280	.	.
Predicted Secondary structure																				.																																																									.	.
Query SS confidence																				.																																																									.	.
Query Sequence		A	Q	S	P	E	K	I	N	L	P	G	M	Q	F	G	L	I	W	.	D	G	D	S	V	E	T	C	S	G	A	F	G	D	Y	L	K	F	N	N	P	H	K	T	S	L	Y	L	S	M	E	L	P	V	F	I	W	D	K	A	A	L	A	D	F	I	V	D	N	R	I	G	Y	A	V	G	.	.	S	I	K
Query Conservation																				.																																																									.	.
Alig confidence																				.																																																									.	.
Template Conservation
Template Sequence		C	R	G	K	V	S	M	F	P	L	N	S	Q	Q	E	L	A	G	C	Y	A	Y	L	A	S	K	G	S	V	F	A	L	T	S	F	Y	E	P	F	G	L	A	P	V	E	A	M	A	S	G	L	P	A	V	V	T	R	N	G	G	P	A	E	I	L	D	G	G	K	Y	G	V	L	V	D	P	E	D	P	E
Template Known Secondary structure			B	T	T								S														T	T								S		B				S								T	T							S	S	B						T	G	G	G	T	S	S					T	T
Template Predicted Secondary structure
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.			.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.
Query SS confidence															.	.
Query Sequence		E	M	Q	E	I	V	D	S	M	T	I	E	T	.	.	Y	K	Q	I	S	E	N	T	K	I	I	S	Q	K	I	R	T	G	S	Y	F	R	D	V	L	E	E	V	I	D	D	L	K	T
Query Conservation															.	.
Alig confidence															.	.															.	.	.
Template Conservation																															.	.	.
Template Sequence		D	I	A	R	G	L	L	K	A	F	E	S	E	E	T	W	S	A	Y	Q	E	K	G	K	Q	R	V	E	E	.	.	.	R	Y	T	W	Q	E	T	A	R	G	Y	L	E	V	I	Q	E
Template Known Secondary structure												S																			.	.	.		S	B
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.				.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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