Job Description P77802 Confidence 6.82% Date Thu Jan 5 12:32:57 GMT 2012 Rank 96 Aligned Residues 57 % Identity 12% Template d1qbea_ SCOP info RNA bacteriophage capsid protein RNA bacteriophage capsid protein RNA bacteriophage capsid protein Resolution 3.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.											.	.	.	.	.	.	90	.	.	.						.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		Q	D	D	Q	R	I	G	S	A	F	I	W	L	D	D	.	.	.	.	.	.	.	.	.	.	G	Q	L	R	I	R	K	I	Q	L	.	.	.	.	.	E	E	S	E	D	N	A	S	V	S	E	Q	T	R	Q	Q	L	M	A	L	A	N	A	P	F	N	E	A	L	T	I	P
Query Conservation																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation
Template Sequence		S	V	S	Q	P	N	Y	K	V	Q	V	K	I	Q	N	P	T	A	C	T	C	D	P	S	V	T	R	Q	A	Y	A	D	V	T	F	S	F	T	Q	Y	S	T	D	E	E	R	A	F	V	R	T	E	L	A	A	L	L	A	S	P	L	L	I	D	A	I	D	Q	L	N	P	A
Template Known Secondary structure																																								T	T																			S								T	S
Template Predicted Secondary structure
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions