Return to main results Retrieve Phyre Job Id

Job DescriptionP77802
Confidence6.80%DateThu Jan 5 12:32:57 GMT 2012
Rank97Aligned Residues63
% Identity11%Templatec2xwxB_
PDB info PDB header:chitin-binding proteinChain: B: PDB Molecule:glcnac-binding protein a; PDBTitle: vibrio cholerae colonization factor gbpa crystal structure
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   286...290.........300.... .....310..... ....320.........330.........340.. ......
Predicted Secondary structure 





...



...












.
Query SS confidence 


















. . .










. . .


























.





Query Sequence  PVIAFLPAAGEVHLTRDGR. . . LLSVQNFTMGN. . . HEVDTRGLPYGIYDVEVEVIVNGRVIS. KRTQRV
Query Conservation   
 


 


 


 


 ...


 
 
 

 ...
 
 

 

 
 


 
 
 
     
.     
Alig confidence 


















...










...


























.





Template Conservation 

 
 
   
 



            

      



 
  



 






    
    
 
   
Template Sequence  TLEAQGEMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDRDGNLQDQQTLDF
Template Known Secondary structure  SS
TT


TT

S


STTS
Template Predicted Secondary structure 

























Template SS confidence 





































































   341........350.........360.........370.........380.........390.........400.........410
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions