Job Description P31466 Confidence 12.57% Date Thu Jan 5 11:47:54 GMT 2012 Rank 3 Aligned Residues 254 % Identity 10% Template c3orgB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:cmclc; PDBTitle: crystal structure of a eukaryotic clc transporter Resolution 3.50 Å

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		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	I	A	N	I	P	V	S	L	R	V	G	I	T	S	G	I	G	L	F	I	G	M	M	G	L	K	N	A	G	V	I	V	A	N	P	E	T	L	V	S	I	G	N	L	T	S	H	S	V	L	L	G	I	L	G	F	F	I	I	A	I	L	A	S	R	N	I	H	A	A	V	L	V	S	I	V	V	T
Query Conservation
Alig confidence																																																																										.	.	.	.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.	.	.	.
Template Sequence		Y	L	L	R	L	V	C	F	L	T	L	L	G	V	T	A	A	L	F	I	F	A	V	D	L	A	V	H	G	L	E	E	L	R	M	K	I	S	R	L	A	G	R	F	A	G	Y	I	L	Y	V	V	S	G	V	A	L	C	L	L	S	T	F	W	C	A	V	L	S	T	E	A	.	.	.	.	.	.	.	.
Template Known Secondary structure																																										S																											S		G	G	G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.								.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.
Query Sequence		T	L	L	G	W	M	L	G	D	V	H	Y	N	G	I	V	S	A	P	P	S	V	M	T	V	V	G	H	V	D	L	A	G	S	F	N	L	G	L	A	G	V	I	F	S	F	M	L	V	N	L	F	D	S	S	G	T	L	I	G	V	T	D	K	A	G	L	A	D	E	K	.	.	.	.	.	.	.	G	K
Query Conservation																																																																									.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																																																																	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	E	G	S	G	L	P	Q	M	K	S	I	L	S	G	F	Y	D	K	M	R	S	A	L	E	L	R	V	L	F	A	K	A	L	G	L	I	C	A	I	G	G	G	L	P	V	G	W	E	G	P	N	V	H	I	A	C	I	I	A	H	Q	F	Y	R	L	G	V	F	K	E	L	C	T
Template Known Secondary structure		.	.	.	.	.	.	.		B		S									T	T	T					G	G	G	G	S																	T	T		S		B	S																T	T	S	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.
Template SS confidence
									163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		288	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.					.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																										.																																			.	.	.	.
Query SS confidence																										.																																			.	.	.	.
Query Sequence		F	P	R	M	K	Q	A	L	Y	V	D	S	I	S	S	V	T	G	S	F	I	G	T	S	.	S	V	T	A	Y	I	E	S	S	S	G	V	S	V	G	G	R	T	G	L	T	A	V	V	V	G	L	L	F	L	L	V	I	F	.	.	.	.	L	S	P	L	A	G	M	V	P	G	Y	A	A	A	G	A	L
Query Conservation																										.																																			.	.	.	.
Alig confidence																										.																																			.	.	.	.
Template Conservation
Template Sequence		D	R	A	L	R	L	Q	T	L	A	A	A	C	A	V	G	L	A	S	S	F	G	A	P	L	G	G	V	L	Y	S	I	E	T	I	A	S	F	Y	L	V	Q	A	F	W	K	G	V	L	S	A	L	S	G	A	I	V	Y	E	L	D	V	S	R	T	Q	T	L	L	Y	A	I	L	G	A	L	M	G	V	L
Template Known Secondary structure		S																					T													T		S	S			T	T																T	T						S		T
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Y	V	G	V	L	M	T	S	S	L	A	R	V	N	W	Q	D	L	T	E	S	V	P	A	F	I	T	A	V	M	M	P	F	S	F	S	I	T	E	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	A	L	F	I	R	C	V	R	S	I	Y	E	L	R	M	R	H	Y	P	G	T	N	R	Y	F	L	V	G	V	V	A	L	F	A	S	A	L	Q	Y	P
Template Known Secondary structure																		S	S	S	T	T			T															T	T	T
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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