 |
Job Description | P0AFH0 | Confidence | 8.37% | Date | Thu Jan 5 11:26:13 GMT 2012 |
Rank | 66 | Aligned Residues | 42 |
% Identity | 21% | Template | d2hs5a1 |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| GntR-like transcriptional regulators
|
Resolution | 2.20 |
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | F | Q | R | E | V | W | K | T | L | R | T | . |
. |
. |
. |
. |
. |
I | P | C | G | Q | V | M | H | Y | G | Q | L | A | E | Q | L | G | R | P | G | A | A | R | A | V | G | A | A | N | G | S |
Query Conservation |   |
|   |
|
|   |   |
|
|   |
|
|   |   | . | . | . | . | . | . |
|
|   |
|   |
|   |
|
|   |
|
|
|   |   |
|
|   |
|   |
|   |
|
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |   |   |   | . | . |
|
|
|   |
|
|
|   |
|
|   |   |
Template Sequence |   |
T | S | R | T | T | R | V | A | G | I | L | R | D | A | I | I | D | G | T | F | R | P | G | A | R | L | S | E | P | D | I | C | A | A | L | D | . |
. |
V | S | R | N | T | V | R | E | A | F | Q | I |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S |
| T | T |
|  |  |
|  |  |  |  |  |  |  |  | T | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | |
|
. | . | . | . | . | . | . | . | . | 70 | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|