 |
Job Description | P0AFH0 | Confidence | 8.32% | Date | Thu Jan 5 11:26:13 GMT 2012 |
Rank | 69 | Aligned Residues | 38 |
% Identity | 21% | Template | d1wh5a_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
87 | . | . | 90 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | P | F | Q | R | E | V | W | K | T | L | R | T | . |
. |
. |
. |
. |
I | P | C | G | Q | V | M | H | Y | G | Q | L | A | E | Q | L | G | R | P | G | A | A | R | A | V |
Query Conservation |   |
|   |
|
|   |   |
|
|   |
|
|   |   | . | . | . | . | . |
|
|   |
|   |
|   |
|
|   |
|
|
|   |   |
|
|   |
|   |
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |   |
|   |
|
Template Sequence |   |
T | A | E | Q | K | E | R | M | L | A | L | A | E | R | I | G | W | R | I | Q | R | Q | D | D | E | V | I | Q | R | F | C | Q | E | T | G | V | P | R | Q | V | L | K | V |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | S |
|
|
| T | T | T |  |  |  |  |  |  |  |  |  |  | S |
|
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
25 | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|