 |
Job Description | P0AFH0 | Confidence | 35.30% | Date | Thu Jan 5 11:26:13 GMT 2012 |
Rank | 21 | Aligned Residues | 60 |
% Identity | 22% | Template | d1tnsa_ |
SCOP info | Putative DNA-binding domain
| Putative DNA-binding domain
| Excisionase-like
|
Resolution | UNK |
|
  |   |
104 | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
. | . | . | . | |
|
|
. | . | . | . | . | 160 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . |
|
|
|
| . | . | . |
|  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | V | M | H | Y | G | Q | L | A | E | Q | L | G | R | P | G | A | A | R | A | V | G | A | A | N | G | S | N | P | I | S | I | V | V | P | C | H | R | V | I | G | R | N | G | T | M | T | . |
G | Y | A | G | . |
. |
. |
G | V | Q | R | K | E | W | L | L | R | H | E | G |
Query Conservation |   |
  |
|   |
|
|   |
|
|
|   |   |
|
|   |
|   |
|   |
|
|
|
|   |
|   |   |   |
|
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |
|   |
|
| . |
|
|   |   | . | . | . |
|   |   |   |
|   |   |
|
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|   |
|
|
|
|
|
|
|
|
|   |
|   |   |
|
|   |   |   |
|
|
|
|   |
| . | . | . | . |   |   |
|   |
|   |
|
|   |
|
|
|   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |
|   |   |
|   |   |
Template Sequence |   |
L | W | V | S | P | K | E | L | A | N | L | P | G | L | P | K | T | S | A | G | V | I | Y | V | A | K | K | Q | G | W | . |
. |
. |
. |
Q | N | R | T | R | A | G | V | K | G | G | K | A | I | E | Y | N | A | N | S | L | P | V | E | A | K | A | A | L | L | L | R | Q | G |
Template Known Secondary structure |   |
|  |  |
|  |  |  |  | T | T |
| S | S | S |
| S | S |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . |
|
|
|
|
| T | T | S | S | S | S |
|
|
|
|  |  | T | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T | S |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | |
|
|
|
. | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|