 |
Job Description | P0AFH0 | Confidence | 11.48% | Date | Thu Jan 5 11:26:13 GMT 2012 |
Rank | 48 | Aligned Residues | 22 |
% Identity | 18% | Template | d1s7oa_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Sigma3 and sigma4 domains of RNA polymerase sigma factors
| YlxM/p13-like
|
Resolution | 2.31 |
|
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
H | Y | G | Q | L | A | E | Q | L | G | R | P | G | A | A | R | A | V | G | A | A | N | G | S |
Query Conservation |   |
|
|   |
|
|
|   |   |
|
|   |
|   |
|   |
|
|
|
|   |
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|
|   |   |
|
| . | . |
|
|   |   |
|
|   |   |   |
|   |
|
Template Sequence |   |
S | L | A | E | I | A | D | E | F | G | . |
. |
V | S | R | Q | A | V | Y | D | N | I | K | R |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  | T | . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
| . | . |
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
40 | . | . | . | . | . | . | . | . | . | |
|
50 | . | . | . | . | . | . | . | . | . | 60 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|