Job Description P0AFH0 Confidence 37.95% Date Thu Jan 5 11:26:13 GMT 2012 Rank 20 Aligned Residues 59 % Identity 19% Template c3k69A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcription regulator; PDBTitle: crystal structure of a putative transcriptional regulator (lp_0360)2 from lactobacillus plantarum at 1.95 a resolution Resolution 1.95 Å

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		87	.	.	90	.	.	.	.	.	.	.		.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure													.																								.
Query SS confidence													.																								.
Query Sequence		T	P	F	Q	R	E	V	W	K	T	L	.	R	T	I	P	C	G	Q	V	M	H	Y	G	Q	L	A	E	Q	L	G	R	P	G	A	.	A	R	A	V	G	A	A	N	G	S	N	P	I	S	I	V	V	P	C	H	R	V	I	G	R	N	G	T	M	T	G	Y	A
Query Conservation													.																								.
Alig confidence													.																								.														.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.
Template Sequence		L	D	F	S	V	A	V	H	S	I	L	Y	L	D	A	H	R	D	S	K	V	A	S	R	E	L	A	Q	S	L	H	L	N	P	V	X	I	R	N	I	L	S	V	L	H	K	H	G	Y	.	.	.	.	.	.	.	.	L	T	G	T	V	G	K	N	G	G	Y	Q
Template Known Secondary structure																T	T	T	T	S		B										T	S		G	G	G	T										T	T	S	.	.	.	.	.	.	.	.	S					S	T	T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions