Return to main results Retrieve Phyre Job Id

Job DescriptionP0AFH0
Confidence12.16%DateThu Jan 5 11:26:13 GMT 2012
Rank44Aligned Residues35
% Identity17%Templatec3hugA_
PDB info PDB header:transcription/membrane proteinChain: A: PDB Molecule:rna polymerase sigma factor; PDBTitle: crystal structure of mycobacterium tuberculosis anti-sigma factor rsla2 in complex with -35 promoter binding domain of sigl
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   94.....100.........110.........120.........130
Predicted Secondary structure 














Query SS confidence 




































Query Sequence  WKTLRTIPCGQVMHYGQLAEQLGRPGAARAVGAANGS
Query Conservation 
 

  

 
 
 

 


  

 
 
 



 
   
Alig confidence 






















..











Template Conservation   
 
  
      
  


  
 ..

  

   
 
Template Sequence  HRAVIQRSYYRGWSTAQIATDLG. . IAEGTVKSRLHY
Template Known Secondary structure  TS


T..S
Template Predicted Secondary structure 



..

Template SS confidence 




































   127..130.........140......... 150.........160.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions