Job Description P0AFH0 Confidence 100.00% Date Thu Jan 5 11:26:13 GMT 2012 Rank 3 Aligned Residues 144 % Identity 35% Template c1t39A_ PDB info PDB header:transferase/dna Chain: A: PDB Molecule:methylated-dna--protein-cysteine PDBTitle: human o6-alkylguanine-dna alkyltransferase covalently2 crosslinked to dna Resolution 3.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		R	L	L	E	E	K	I	A	T	P	L	G	P	L	W	V	I	C	D	E	Q	F	R	L	R	A	V	E	W	E	E	Y	S	E	R	M	V	Q	L	L	D	I	H	Y	R	K	E	G	Y	E	R	I	S	A	T	N	P	G	G	L	S	D	K	L	R	E	Y	F	A	G	N	L	S	I	I	D	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	M	K	R	T	T	L	D	S	P	L	G	K	L	E	L	S	G	C	E	Q	G	.	L	H	E	I	K	L	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	P	L	M	Q	C	T	A	W	L	N	A	Y	F	H	Q	P	E	A	I	E	E	F	P	V	P
Template Known Secondary structure											T	T				B					T	T		.					B				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		G	G	G	G	G	G	S
Template Predicted Secondary structure																								.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.																							.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
				79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	T	L	P	T	A	T	G	G	T	P	F	Q	R	E	V	W	K	T	L	R	T	I	P	C	G	Q	V	M	H	Y	G	Q	L	A	E	Q	L	G	R	P	G	A	A	R	A	V	G	A	A	N	G	S	N	P	I	S	I	V	V	P	C	H	R	V	I	G	R	N	G	T	M	T	G	Y	A	G	G	V
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		A	L	H	H	P	V	F	Q	Q	E	S	F	T	R	Q	V	L	W	K	L	L	K	V	V	K	F	G	E	V	I	S	Y	Q	Q	L	A	A	L	A	G	N	P	K	A	A	R	A	V	G	G	A	M	R	G	N	P	V	P	I	L	I	P	C	H	R	V	V	C	S	S	G	A	V	G	N	Y	S	G	G	L
Template Known Secondary structure					S					S														T	S		T	T												T	S		T	T		S									T		S	S	B	T	T	B		T	T	S				T	T	S						T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	R	K	E	W	L	L	R	H	E	G	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	V	K	E	W	L	L	A	H	E	G	H	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions