Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 56 Aligned Residues 83 % Identity 41% Template d1mnga1 SCOP info Long alpha-hairpin Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), N-terminal domain Resolution 1.80

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																																	.														.	.	.	.	.	.	.
Query SS confidence																																																	.														.	.	.	.	.	.	.
Query Sequence		M	S	F	E	L	P	A	L	P	Y	A	K	D	A	L	A	P	H	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	T	A	.	F	E	G	K	S	L	E	E	I	I	R	S	S	.	.	.	.	.	.	.	E	G	G	V	F	N	N	A	A	Q	V	W
Query Conservation																																																	.														.	.	.	.	.	.	.
Alig confidence																																																	.														.	.	.	.	.	.	.
Template Conservation
Template Sequence		Y	P	F	K	L	P	D	L	G	Y	P	Y	E	A	L	E	P	H	I	D	A	K	T	M	E	I	H	H	Q	K	H	H	G	A	Y	V	T	N	L	N	A	A	L	E	K	Y	P	Y	L	H	G	V	E	V	E	V	L	L	R	H	L	A	A	L	P	Q	D	I	Q	T	A	V	R	N	N	G	G	G	H	L
Template Known Secondary structure			S								S		G	G	G	G	T	T	T	S											T															T		G	G	G	T	T									T	G	G	G	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		73	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	T	F	Y	W	N	C	L	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	S	L	F	W	R	L	L	T	P
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions