Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 57 Aligned Residues 83 % Identity 43% Template d1gv3a1 SCOP info Long alpha-hairpin Fe,Mn superoxide dismutase (SOD), N-terminal domain Fe,Mn superoxide dismutase (SOD), N-terminal domain Resolution 2.0

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Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.		.	.	.	.	50	.	.	.	.	.	.	.	.	.	60								.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																															.																.	.	.	.	.	.	.
Query SS confidence																																															.																.	.	.	.	.	.	.
Query Sequence		M	S	F	E	L	P	A	L	P	Y	A	K	D	A	L	A	P	H	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	.	T	A	F	E	G	K	S	L	E	E	I	I	R	S	S	.	.	.	.	.	.	.	E	G	G	V	F	N	N	A	A	Q	V	W
Query Conservation																																															.																.	.	.	.	.	.	.
Alig confidence																																															.																.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	P	A	E	L	P	P	L	P	Y	G	Y	D	A	L	E	K	A	I	D	A	E	T	M	K	L	H	H	D	K	H	H	A	A	Y	V	N	N	L	N	N	A	L	K	K	H	P	E	L	Q	N	S	S	V	E	A	L	L	R	D	L	N	S	V	P	E	D	I	R	T	T	V	R	N	N	G	G	G	H	L
Template Known Secondary structure		T	T							S	S		T	T	T	T	T	T	T	S											T															T		G	G	G	G	G	S								T	G	G	G	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		73	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	H	T	F	Y	W	N	C	L	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	T	I	F	W	Q	I	M	S	P
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions