Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 29 Aligned Residues 190 % Identity 35% Template c3dc5C_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:superoxide dismutase [mn] 2; PDBTitle: crystal structure of a manganese superoxide dismutases from2 caenorhabditis elegans Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		M	S	F	E	L	P	A	L	P	Y	A	K	D	A	L	A	P	H	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	T	A	F	E	.	G	K	S	L	E	E	I	I	R	S	S	E	G	G	V	F	N	N	A	A	Q	V	W	N	H	T	F	Y	W	N
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		M	K	H	T	L	P	D	L	P	F	D	Y	A	D	L	E	P	V	I	S	H	E	I	M	Q	L	H	H	Q	K	H	H	A	T	Y	V	N	N	L	N	Q	I	E	E	K	L	H	E	A	V	S	K	G	N	L	K	E	A	I	A	L	Q	P	A	L	K	F	N	G	G	G	H	I	N	H	S	I	F	W	T
Template Known Secondary structure										S	S		T	T	T	T	T	T	T	S											T																							T								T
Template Predicted Secondary structure
Template SS confidence
		0	.	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		C	L	A	P	N	A	G	G	E	P	T	G	K	V	A	E	A	I	A	A	S	F	G	S	F	A	D	F	K	A	Q	F	T	D	A	A	I	K	N	F	G	S	G	W	T	W	L	V	K	N	S	.	D	G	K	L	A	I	V	S	T	S	N	A	G	T	P	L	T	T	D	A	T	P	L	L	T	V	D	V
Query Conservation																																																					.
Alig confidence							.																																														.																.	.
Template Conservation							.																																																														.	.
Template Sequence		N	L	A	K	D	.	G	G	E	P	S	K	E	L	M	D	T	I	K	R	D	F	G	S	L	D	N	L	Q	K	R	L	S	D	I	T	I	A	V	Q	G	S	G	W	G	W	L	G	Y	C	K	K	D	K	I	L	K	I	A	T	C	A	N	Q	D	P	L	.	.	E	G	M	V	P	L	F	G	I	D	V
Template Known Secondary structure		T	B		T	T	.																	S	S														T			S	S									T	T	T	T									T	T				.	.		S	S
Template Predicted Secondary structure							.																																																														.	.
Template SS confidence
		80	.	.	.	.		.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.			.	.	.	.	150	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	H	A	Y	Y	I	D	Y	R	N	A	R	P	G	Y	L	E	H	F	W	A	L	V	N	W	E	F	V	A	K	N	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	E	H	A	Y	Y	L	Q	Y	K	N	V	R	P	D	Y	V	H	A	I	W	K	I	A	N	W	K	N	I	S	E	R	F	A	N
Template Known Secondary structure		S	G	G	G	T					T	T										G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions