Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 12 Aligned Residues 190 % Identity 53% Template c3ceiA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase; PDBTitle: crystal structure of superoxide dismutase from helicobacter2 pylori Resolution 2.40 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	E	L	P	A	L	P	Y	A	K	D	A	L	A	P	H	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	T	A	F	E	G	K	S	L	E	E	I	I	R	S	S	E	G	G	V	F	N	N	A	A	Q	V	W	N	H	T	F	Y	W	N	C	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	L	R	E	L	P	F	A	K	D	S	M	G	D	F	L	S	P	V	A	F	D	F	H	H	G	K	H	H	Q	T	Y	V	N	N	L	N	N	L	I	K	G	T	D	F	E	K	S	S	L	F	A	I	L	T	K	S	S	G	G	V	F	N	N	A	A	Q	I	Y	N	H	D	F	Y	W	D	C	L	S
Template Known Secondary structure								S	S		T	T		S	T	T	T	S									T	T	T														T	T	S	T	T	T	T																														T	B
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		P	N	A	G	G	E	P	T	G	K	V	A	E	A	I	A	A	S	F	G	S	F	A	D	F	K	A	Q	F	T	D	A	A	I	K	N	F	G	S	G	W	T	W	L	V	K	N	S	.	D	G	K	L	A	I	V	S	T	S	N	A	G	T	P	L	T	T	D	A	T	P	L	L	T	V	D	V	W	E	H
Query Conservation																																																		.
Alig confidence							.																																											.
Template Conservation							.
Template Sequence		P	K	A	T	A	.	L	S	D	E	L	K	G	A	L	E	K	D	F	G	S	L	E	K	F	K	E	D	F	I	K	S	A	T	T	L	F	G	S	G	W	N	W	A	A	Y	N	L	D	T	Q	K	I	E	I	I	Q	T	S	N	A	Q	T	P	V	T	D	K	K	V	P	L	L	V	V	D	V	W	E	H
Template Known Secondary structure		S	S				.														S	S																	S	S									T	T	T										T	T			G	G	G	G	T										S	G	G
Template Predicted Secondary structure							.
Template SS confidence
		82	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	Y	I	D	Y	R	N	A	R	P	G	Y	L	E	H	F	W	A	L	V	N	W	E	F	V	A	K	N	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Y	Y	I	D	H	K	N	A	R	P	V	Y	L	E	K	F	Y	G	H	I	N	W	H	F	V	S	Q	C	Y	E	W
Template Known Secondary structure		G	T					T	T												T	B
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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