Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 28 Aligned Residues 191 % Identity 36% Template c3bfrA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:superoxide dismutase [mn]; PDBTitle: the crystal structure of sod2 from saccharomyces cerevisiae Resolution 2.05 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.									.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.	.	.
Query Sequence		S	F	E	L	P	A	L	P	Y	A	K	D	A	L	A	P	H	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	T	A	F	E	G	K	S	L	E	E	.	.	.	.	.	.	.	.	I	I	R	S	S	E	G	G	V	F	N	N	A	A	Q	V	W	N
Query Conservation																																																								.	.	.	.	.	.	.	.
Alig confidence																																																								.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	V	T	L	P	D	L	K	W	D	F	G	A	L	E	P	Y	I	S	G	Q	I	N	E	L	H	Y	T	K	H	H	Q	T	Y	V	N	G	F	N	T	A	V	D	Q	F	Q	E	L	S	D	L	L	A	K	E	P	S	P	A	N	A	R	K	M	I	A	I	Q	Q	N	I	K	F	H	G	G	G	F	T	N
Template Known Secondary structure										S		G	G	G	G	T	T	T	S											T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		74	.	.	.	.	.	80	.	.	.				.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																															.	.
Query SS confidence												.	.	.																																															.	.
Query Sequence		H	T	F	Y	W	N	C	L	A	P	.	.	.	N	A	G	G	E	P	T	G	K	V	A	E	A	I	A	A	S	F	G	S	F	A	D	F	K	A	Q	F	T	D	A	A	I	K	N	F	G	S	G	W	T	W	L	V	K	N	.	.	S	D	G	K	L	A	I	V	S	T	S	N	A	G	T	P	L	T	T
Query Conservation												.	.	.																																															.	.
Alig confidence												.	.	.																																															.	.																.
Template Conservation																																																																														.
Template Sequence		H	C	L	F	W	E	N	L	A	P	E	S	Q	G	G	G	E	P	P	T	G	A	L	A	K	A	I	D	E	Q	F	G	S	L	D	E	L	I	K	L	T	N	T	K	L	A	G	V	Q	G	S	G	W	A	F	I	V	K	N	L	S	N	G	G	K	L	D	V	V	Q	T	Y	N	Q	D	T	.	V	T	G
Template Known Secondary structure								T	B			G	G	G	T	T	T																S	S														T			S	S									T	T	T	T	S									T	T			.			T
Template Predicted Secondary structure																																																																														.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.		.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	T	P	L	L	T	V	D	V	W	E	H	A	Y	Y	I	D	Y	R	N	A	R	P	G	Y	L	E	H	F	W	A	L	V	N	W	E	F	V	A	K	N	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	L	V	P	L	V	A	I	D	A	W	E	H	A	Y	Y	L	Q	Y	Q	N	K	K	A	D	Y	F	K	A	I	W	N	V	V	N	W	K	E	A	S	R	R	F	D	A
Template Known Secondary structure		T										S	G	G	G	T					T	T									G	G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions