Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 27 Aligned Residues 189 % Identity 40% Template c2cw3A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:iron superoxide dismutase; PDBTitle: x-ray structure of pmsod2, superoxide dismutase from2 perkinsus marinus Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.				.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																				.	.	.
Query SS confidence																																																				.	.	.
Query Sequence		S	F	E	L	P	A	L	P	Y	A	K	D	A	L	A	P	H	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	T	A	F	E	G	K	.	.	.	S	L	E	E	I	I	R	S	S	E	G	G	V	F	N	N	A	A	Q	V	W	N	H	T	F	Y	W
Query Conservation																																																				.	.	.
Alig confidence							.																																													.	.	.
Template Conservation							.
Template Sequence		G	L	R	M	T	.	L	P	Y	G	L	E	A	L	E	P	V	I	S	A	A	T	V	D	F	H	Y	N	K	H	H	Q	G	Y	I	Q	K	L	L	D	A	T	G	L	P	E	S	R	I	N	L	K	S	L	V	T	L	G	P	D	R	A	G	E	N	V	F	N	A	A	G	Q	I	Y	N	H	N	M	Y	W
Template Known Secondary structure		S	S				.		S	S		T	T	T	T	T	T	T	S											T																	G	G	G
Template Predicted Secondary structure							.
Template SS confidence
		7	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		79	80	.	.	.	.	.	.	.			.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.			.	150	.	.	.
Predicted Secondary structure											.	.																																												.																			.	.
Query SS confidence											.	.																																												.																			.	.
Query Sequence		N	C	L	A	P	N	A	G	G	.	.	E	P	T	G	K	V	A	E	A	I	A	A	S	F	G	S	F	A	D	F	K	A	Q	F	T	D	A	A	I	K	N	F	G	S	G	W	T	W	L	V	K	N	S	.	D	G	K	L	A	I	V	S	T	S	N	A	G	T	P	L	T	T	.	.	D	A	T	P	L
Query Conservation											.	.																																												.																			.	.
Alig confidence											.	.																																												.																			.	.
Template Conservation
Template Sequence		L	S	M	V	P	T	S	G	S	G	R	H	V	P	P	R	L	L	K	L	I	R	A	R	W	G	N	V	D	E	M	K	E	N	F	M	R	K	A	T	A	L	F	G	S	G	W	I	W	L	V	W	D	T	R	E	R	R	L	D	L	V	G	T	K	D	A	H	S	P	L	S	E	D	A	G	K	I	P	L
Template Known Secondary structure			T	B			T	T					S														S	S																	S	S									T	T	T	T									T	T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	V	D	V	W	E	H	A	Y	Y	I	D	Y	R	N	A	R	P	G	Y	L	E	H	F	W	A	L	V	N	W	E	F	V	A	K	N	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	C	D	V	W	E	H	A	Y	Y	L	D	Y	Q	H	D	R	A	A	Y	L	T	R	W	W	S	L	I	N	W	E	F	A	D	S	N	L
Template Known Secondary structure							S	G	G	G	T					T	T											T	T	B								T
Template Predicted Secondary structure
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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