Job Description P0AGD3 Confidence 100.00% Date Thu Jan 5 11:28:49 GMT 2012 Rank 30 Aligned Residues 181 % Identity 29% Template c1cojA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein (superoxide dismutase); PDBTitle: fe-sod from aquifex pyrophilus, a hyperthermophilic bacterium Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		11	.	.	.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.								.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.																																					.	.	.	.	.	.	.
Query SS confidence										.	.	.	.																																					.	.	.	.	.	.	.
Query Sequence		A	K	D	A	L	A	P	H	.	.	.	.	I	S	A	E	T	I	E	Y	H	Y	G	K	H	H	Q	T	Y	V	T	N	L	N	N	L	I	K	G	T	A	F	E	G	K	S	L	E	.	.	.	.	.	.	.	E	I	I	R	S	S	E	G	G	V	F	N	N	A	A	Q	V	W	N	H	T	F	Y	W	N
Query Conservation										.	.	.	.																																					.	.	.	.	.	.	.
Alig confidence										.	.	.	.																																					.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	D	H	L	K	P	Q	N	L	E	G	I	S	N	E	Q	I	E	P	H	F	E	A	H	Y	K	G	Y	V	A	K	Y	N	E	I	Q	E	K	L	A	D	Q	N	F	A	D	R	S	K	A	N	Q	N	Y	S	E	Y	R	E	L	K	V	E	E	T	F	N	Y	M	G	V	V	L	H	E	L	Y	F	G
Template Known Secondary structure				G	G	G				S		S	S	S											T																			T	T	T	T		G	G	G			S	S	S																									T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.
Query SS confidence																																																					.
Query Sequence		C	L	A	P	N	A	G	G	E	P	T	G	K	V	A	E	A	I	A	A	S	F	G	S	F	A	D	F	K	A	Q	F	T	D	A	A	I	K	N	F	G	S	G	W	T	W	L	V	K	N	S	.	D	G	K	L	A	I	V	S	T	S	N	A	G	T	P	L	T	T	D	A	T	P	L	L	T	V	D	V
Query Conservation																																																					.
Alig confidence																																							.	.													.
Template Conservation																																							.	.
Template Sequence		M	L	T	P	G	G	K	G	E	P	S	E	A	L	K	K	K	I	E	E	D	I	G	G	L	D	A	C	T	N	E	L	K	A	A	A	M	.	.	A	F	R	G	W	A	I	L	G	L	D	I	F	S	G	R	L	V	V	N	G	L	D	A	H	N	V	Y	N	L	T	G	L	I	P	L	I	V	I	D	T
Template Known Secondary structure		T	B		T	T		B	S														T	S															.	.			S	S								T	T	T	T								S	B	T	T	B	S			T	T
Template Predicted Secondary structure																																							.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	E	H	A	Y	Y	I	D	Y	R	N	A	R	P	G	Y	L	E	H	F	W	A	L	V	N	W	E	F	V	A	K	N	L	A	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	E	H	A	Y	Y	V	D	Y	K	N	K	R	P	P	Y	I	D	A	F	F	K	N	I	N	W	D	V	V	N	E	R	F	E	K
Template Known Secondary structure		S	G	G	G	T					T	T												T	B	B
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions