 |
Job Description | P64634 | Confidence | 4.80% | Date | Thu Jan 5 12:10:03 GMT 2012 |
Rank | 84 | Aligned Residues | 80 |
% Identity | 13% | Template | c3bzeA_ |
PDB info |
PDB header:immune system | Chain: A: PDB Molecule:hla class i histocompatibility antigen, alpha chain e; |
PDBTitle: the human non-classical major histocompatibility complex molecule hla-2 e
|
Resolution | 2.50 Å |
|
 |
  |   |
100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | |
. | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | A | L | A | A | L | L | P | E | H | A | W | L | T | T | I | S | W | Q | Q | G | T | L | E | I | K | G | L | T | T | S | I | T | A | L | N | A | L | E | T | S | L | R | Q | . |
D | A | S | F | H | L | N | Q | R | G | A | T | Q | Q | D | A | Q | G | R | W | Q | F | E | Y | Q | L | T | R | K | V | S | D | E | H | V |
Query Conservation |   |
  |   |
|   |   |   |
|
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |
|   |
|   |
|   |
|   |   |   |   |   |
|
|   |
|   |   |   |
|   |   | . |
|
|   |
|   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |
|
|
|
|   |   |
|   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | T | L | L | H | L | E | P | P | K | T | H | V | T | H | H | P | I | S | D | H | E | A | T | L | R | C | W | A | L | G | F | Y | P | A | E | I | T | L | T | W | Q | Q | D | G | E | G | H | T | Q | D | T | E | L | V | E | T | R | P | A | G | D | G | T | F | Q | K | W | A | A | V | V | V | P | S | G | E | E | Q | R |
Template Known Secondary structure |   |
 |  |  | T |
|
| B |
|
|  |  |  |  |  |  |  |  |
| S | S | S |  |  |  |  |  |  |  |  |  |  |  | B | S | S |
|
|  |  |  |  |  |
| S | S |
| S | S |
|
|
|
|  |  |
|
|
|  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |  | T | T |
| G | G | G |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . |
  |
  |   |
179 |
Predicted Secondary structure |   |
|
Query SS confidence |   |
|
Query Sequence |   |
L |
Query Conservation |   |
  |
Alig confidence |   |
|
Template Conservation |   |
|
Template Sequence |   |
Y |
Template Known Secondary structure |   |
|
Template Predicted Secondary structure |   |
 |
Template SS confidence |   |
|
  |   |
257 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|