Job Description P64634 Confidence 61.38% Date Thu Jan 5 12:10:03 GMT 2012 Rank 2 Aligned Residues 72 % Identity 17% Template c2w7vB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:general secretion pathway protein l; PDBTitle: periplasmic domain of epsl from vibrio parahaemolyticus Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		96	.	.	.	100	.	.	.	.	.	.	.						.	.	110	.	.	.	.	.	.	.	.	.	120			.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.														.	.
Query SS confidence														.	.	.	.	.														.	.
Query Sequence		Q	S	A	L	E	A	L	A	A	L	L	P	.	.	.	.	.	E	H	A	W	L	T	T	I	S	W	Q	Q	G	.	.	T	L	E	I	K	G	L	T	T	S	I	T	A	L	N	A	L	E	T	S	L	R	Q	D	A	S	F	H	L	N	Q	R	G	A	T	Q	Q	D	A	Q	G	R	W	Q	F	E	Y	Q
Query Conservation														.	.	.	.	.														.	.
Alig confidence														.	.	.	.	.														.	.																									.	.	.													.	.
Template Conservation																																																										.	.	.													.	.
Template Sequence		V	A	X	L	S	W	L	A	A	L	P	A	T	L	G	Q	V	K	D	L	E	I	T	S	F	K	Y	D	G	Q	R	G	E	V	R	I	H	A	R	S	S	D	F	Q	P	F	E	Q	A	R	V	K	L	A	E	K	.	.	.	F	N	V	E	Q	G	Q	L	N	R	S	N	.	.	V	V	X	G	S	F	V
Template Known Secondary structure								G	G	G							T	S	T	T										T	T	T	T									S	S	S												T	T	.	.	.													.	.
Template Predicted Secondary structure																																																										.	.	.													.	.
Template SS confidence
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380				.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.	.
		169	170	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	R	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	R	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		401	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions