Return to main results Retrieve Phyre Job Id

Job DescriptionP64634
Confidence7.29%DateThu Jan 5 12:10:03 GMT 2012
Rank39Aligned Residues77
% Identity19%Templatec2akrA_
PDB info PDB header:immune systemChain: A: PDB Molecule:t-cell surface glycoprotein cd1d1; PDBTitle: structural basis of sulfatide presentation by mouse cd1d
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140.........150.........160.........170.........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  EALAALLPEHAWLTTISWQQGTLEIKGLTTSITALNALETSLRQDASFHLNQRGATQQDAQGRWQFEYQLTRKVSDEHVL
Query Conservation    
   

  


  
      
 
 
 
     

 
   
  

 
  
 
        
   
   
          
Alig confidence 













...






























































Template Conservation    
 
 
 
 
 
 ...       
 
 
 



  
 
 
   
            
  



     
 
       
Template Sequence  SDLEKQEKPVAWLS. . . SVPGHRQLVCHVSGFYPKPVWVMWMRGDQEQQGTHRGDFLPNADETWYLQATLDVEAGEEAGL
Template Known Secondary structure  T

B

...

BSS

TT
TT




TTS
TT
STT
Template Predicted Secondary structure 








...





























Template SS confidence 















































































   181........190.... .....200.........210.........220.........230.........240.........250.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions