Job Description P64634 Confidence 22.75% Date Thu Jan 5 12:10:03 GMT 2012 Rank 8 Aligned Residues 62 % Identity 10% Template c1uv7A_ PDB info PDB header:transport Chain: A: PDB Molecule:general secretion pathway protein m; PDBTitle: periplasmic domain of epsm from vibrio cholerae Resolution 1.7 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	A	W	L	T	T	I	S	W	Q	Q	G	T	L	E	I	K	G	L	T	T	S	I	T	A	L	N	A	L	E	T	S	L	R	Q	D	A	S	F	H	L	N	Q	R	G	A	T	Q	Q	D	A	Q	G	R	W	Q	F	E	Y	Q	L	T	R	K	V	S	D
Query Conservation
Alig confidence																																																		.	.	.	.							.
Template Conservation																																																		.	.	.	.							.
Template Sequence		N	I	E	L	I	R	V	Q	P	R	G	E	X	X	Q	V	W	I	Q	P	L	P	F	S	Q	L	V	S	W	I	A	Y	L	Q	E	R	Q	G	V	S	V	D	A	I	D	I	D	R	.	.	.	.	G	V	V	E	V	K	.	R	L	Q	L	K	R	G	G
Template Known Secondary structure		T										S	S									B																S												.	.	.	.							.
Template Predicted Secondary structure																																																		.	.	.	.							.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.					.	.	150	.	.	.		.	.	.	.	.	.	160	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions