Job Description P64634 Confidence 5.57% Date Thu Jan 5 12:10:03 GMT 2012 Rank 61 Aligned Residues 78 % Identity 15% Template c1gzpA_ PDB info PDB header:glycoprotein Chain: A: PDB Molecule:t-cell surface glycoprotein cd1b; PDBTitle: cd1b in complex with gm2 ganglioside Resolution 2.8 Å

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		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																						.
Query SS confidence																						.
Query Sequence		E	A	L	A	A	L	L	P	E	H	A	W	L	T	T	I	S	W	Q	Q	.	G	T	L	E	I	K	G	L	T	T	S	I	T	A	L	N	A	L	E	T	S	L	R	Q	D	A	S	F	H	L	N	Q	R	G	A	T	Q	Q	D	A	Q	G	R	W	Q	F	E	Y	Q	L	T	R	K	V	S	D	E	H
Query Conservation																						.
Alig confidence																						.
Template Conservation
Template Sequence		A	D	L	Q	R	Q	V	K	P	E	A	W	L	S	S	G	P	S	P	G	P	G	R	L	Q	L	V	C	H	V	S	G	F	Y	P	K	P	V	W	V	M	W	M	R	G	E	Q	E	Q	Q	G	T	Q	L	G	D	I	L	P	N	A	N	W	T	W	Y	L	R	A	T	L	D	V	A	D	G	E	A	A
Template Known Secondary structure					T			B												S	S	T	T										S		B	S	S									T	T				T	T										T	T	T												G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions