 |
Job Description | B8YM76 | Confidence | 36.92% | Date | Thu Jan 5 10:55:43 GMT 2012 |
Rank | 37 | Aligned Residues | 124 |
% Identity | 16% | Template | d2ihta3 |
SCOP info | Thiamin diphosphate-binding fold (THDP-binding)
| Thiamin diphosphate-binding fold (THDP-binding)
| Pyruvate oxidase and decarboxylase PP module
|
Resolution | 2.00 |
|
 |
  |   |
32 | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | |
|
|
. | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
| . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | L | R | D | S | L | S | D | K | P | A | K | N | I | I | L | L | I | G | D | G | . |
. |
. |
M | G | D | S | E | I | T | A | A | R | N | Y | A | E | G | A | G | G | F | F | K | G | I | D | A | L | P | L | T | G | Q | Y | T | H | Y | A | L | N | K | K | T | G | K | P | D | Y | V | T | D | S | A | A | S | A | T |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|   |   |   |   |
|
|
|
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |
|
|
|
|
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|   |
|   |
|   | . |   |   |
|
|   |
|   |
|
|
|
|
|   |   |   |   |   |
|
|   |
|
|   |   |   |   |   |
|
|   |
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
Template Sequence |   |
A | A | I | G | A | Q | X | A | R | P | D | . |
Q | P | T | F | L | I | A | G | D | G | G | F | H | S | N | S | S | D | L | E | T | I | A | R | L | N | L | P | I | V | T | V | V | V | N | N | D | T | N | G | L | I | E | L | Y | Q | N | I | G | H | H | R | S | H | D | P | A | V | K | F | G | G | V | D | F | V | A | L |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | S | T | T | . | S |
|  |  |  |  |  |  |  |  |  |  |  |  | T | G | G | G |  |  |  |  |  |  |  | T |
|
|
|  |  |  |  |  |  |
| S | B |
|  |  |  |  |  |  |  |  |  |  |  | S | S |
|
| G | G | G | T | B |
|
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
444 | . | . | . | . | . | 450 | . | . | . | . | |
. | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . |
  |
  |   |
109 | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | W | S | T | G | V | K | T | Y | N | G | A | L | G | V | D | I | H | E | K | D | H | P | T | I | L | E | M | A | K | A | A | G | L | A | T | G | N | V | S | T | A | E | L | Q | D | A | T | P | A | A | L | E | A |
Query Conservation |   |
|   |
|
|
|   |
|
|   |
|
|   |
|
|
|   |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |   |
|   |   |
|
|
|
|
|
|   |   |
|
|
|
|
|
|
|
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|   |
|   |   |   |   | . | . | . | . | . |   |
|   |   |   |   |
|
|   |   |
|
|   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |
|
| . |   |
|   |   |
|   |   |   |
|   |
Template Sequence |   |
A | E | A | N | G | V | D | A | T | . |
. |
. |
. |
. |
R | A | T | N | R | E | E | L | L | A | A | L | R | K | G | A | E | L | G | R | P | F | L | I | E | V | P | V | N | . |
Y | D | F | Q | P | G | G | F | G | A |
Template Known Secondary structure |   |
 |  |  | T | T |
|  |  |  | . | . | . | . | . |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | S |
|  |  |  |  |  |  | B |
| . |
|
|
|
| G | G | G |
| G | G |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
| . |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
523 | . | . | . | . | . | . | 530 | . | |
|
|
|
|
. | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | |
. | . | . | . | . | . | . | . | . | 570 |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|