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Job DescriptionB8YM76
Confidence99.10%DateThu Jan 5 10:55:43 GMT 2012
Rank29Aligned Residues257
% Identity19%Templatec3b5qB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative sulfatase yidj; PDBTitle: crystal structure of a putative sulfatase (np_810509.1)2 from bacteroides thetaiotaomicron vpi-5482 at 2.40 a3 resolution
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   41........50.........60.........70.........80.........90.........100.........110...
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Query Sequence  KPAKNIILLIGDGMGDSEITAARNYAEGAGGFFKGIDALPLTGQYTHYALNKKTGKPDYVTDSAASATAWSTG. . . . . . .
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Template Sequence  EKP. NFLIIQCDHLTQRVVGAY. . . . GQTQGCTLPIDEVASRGVIFSNAY. . . . . . . VGCPLSQPSRAALWSGXXPHQTN
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   14.. ...20.........30.... .....40.........50........ .60.........70.........80.
 
   114.....120.........130.........140.........150.........160.........170.........180.........190...
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Query Sequence  VKTYNGALGVDIHEKDHPTILEMAKAAGLATGNVSTAELQDATPAALEAHVTSRKCYGPSATSEKCPGNALEKGGKGSIT
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Template Sequence  VRSNSSEPVNTRLPENVPTLGSLFSESGYEAVHFGKTHDXGSLRGFKHKEPVAKPFTDP. . . . . . . . . . . . . . . . . . . . .
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   82.......90.........100.........110.........120.........130.........140
 
   194.....200.........210.........220.........230.........240.........250.........260.........270...
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Query Sequence  EQLLNARADVTLGGGAKTFAETATAGEWQGKTLREQAQARGYQLVSDAASLNSVTEANQQKPLLGLFADGNMPVRWLGPK
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . EFPVNNDSFLD. . . . . . . . . . . . . . . . . . . . . . . . . . .
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   141........150.
 
   274.....280.........290.........300.........310.... .....320...
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Query Sequence  ATYHGNIDKPAVTCTPNPQRNDSVPTLAQMTDKAIELLSKN. EKGFFLQVE. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . VGTCEDAVAYLSNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPE
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   152.......160.........170.........180.........190.........200....
 
   324.....330.........340.........350.........360. ........370.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GASIDKQDHAANPCGQIGETVDLDEAVQRALEFAKKEG. . . NTLVIVTADH
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Template Sequence  LPDNFDVEDWSNIPTPVQYICCSHRRXTQAAHWNEENYRHYIAAFQHYTKXVSKQVDSVLKALYSTPAGRNTIVVIXADH
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   205....210.........220.........230.........240.........250.........260.........270.........280....
 
   372.......380.........390.........400.........410.........420.........430..... ....440.....
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Query Sequence  AHASQIVAPDTKAPGLTQALNTKDGAVMVMSYGNSEEDSQEHTGSQLRIAAYGPHAANVVGLTD. . . . . . QTDLFYTMKA
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Template Sequence  GDGXASHR. . . . . . . . . . . . . . . . . . . . . . . . XVTKHISFYDEXTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCD
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TTGGG........................

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   285....290.. .......300.........310.........320.........330.........340
 
   446...450
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Query Sequence  ALGLK
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Template Sequence  LAGIA
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   341....
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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