Job Description B8YM76 Confidence 100.00% Date Thu Jan 5 10:55:43 GMT 2012 Rank 9 Aligned Residues 337 % Identity 31% Template c2iucB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: structure of alkaline phosphatase from the antarctic2 bacterium tab5 Resolution 1.95 Å

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure
Query SS confidence
Query Sequence		K	P	A	K	N	I	I	L	L	I	G	D	G	M	G	D	S	E	I	T	A	A	R	N	Y	A	E	G	A	G	G	F	F	K	G	I	D	A	L	P	L	T	G	Q	Y	T	H	Y	A	L	N	K	K	T	G	K	P	D	Y	V	T	D	S	A	A	S	A	T	A	W	S	T	G	V	K	T	Y	N	G	A
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	T	P	K	N	V	I	L	L	I	S	D	G	A	G	L	S	Q	I	S	S	T	F	Y	F	K	S	G	T	P	N	.	.	.	.	.	.	.	.	.	.	Y	T	Q	F	K	N	I	G	L	I	K	T	S	S	S	R	E	D	V	T	D	S	A	S	G	A	T	A	F	S	C	G	I	K	T	Y	N	A	A
Template Known Secondary structure					S								T	B								G	G	G	T	S	S	S	S			G	.	.	.	.	.	.	.	.	.	.	G	G	G												S	S		S	S													S					T	T
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.											.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		L	G	V	D	I	H	E	K	D	H	P	T	I	L	E	M	A	K	A	A	G	L	A	T	G	N	V	S	T	A	E	L	Q	D	A	T	P	A	A	L	E	A	H	V	T	S	R	K	C	Y	G	P	S	A	T	S	E	K	C	P	G	N	A	L	E	K	G	G	K	G	S	I	T	E	Q	L	L	N	A	R
Query Conservation
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	V	A	D	D	S	T	A	V	K	S	I	V	E	I	A	A	L	N	S	I	K	T	G	V	V	A	T	S	S	I	T	H	A	T	P	A	S	F	Y	A	H	A	L	N	R	G	L	E	E	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	M	D	M	T	E	S	D
Template Known Secondary structure		B	S	B		T	T	S		B											T	T											T	T	S						T	T			B	S		T	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	S
Template Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																				.	.	.	.	.	.	160	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		A	D	V	T	L	G	G	G	A	K	T	F	A	E	T	A	T	A	G	E	W	Q	G	K	T	L	R	E	Q	A	Q	A	R	G	Y	Q	L	V	S	D	A	.	A	S	L	N	S	V	T	E	A	N	Q	Q	K	P	L	L	G	L	F	A	D	G	N	M	P	V	R	W	L	G	P	K	A	T	Y	H	G	N
Query Conservation																																											.
Alig confidence																.	.	.	.	.																							.							.	.	.	.																						.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.																														.	.	.	.																						.	.	.	.	.	.	.
Template Sequence		L	D	F	F	A	G	G	G	L	N	Y	F	T	S	.	.	.	.	.	R	S	D	S	K	D	V	L	A	I	L	K	G	N	Q	F	T	I	N	T	T	G	L	T	D	F	S	S	I	.	.	.	.	A	S	N	R	K	M	G	F	L	L	A	D	E	A	M	P	T	M	E	K	G	.	.	.	.	.	.	.
Template Known Secondary structure										T					S	.	.	.	.	.		T	T											T	T					S	S					S	T	T	T	.	.	.	.	T	T		S							S	S	S	S				T	T	T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.																														.	.	.	.																						.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.					.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	D	K	P	A	V	T	C	T	P	N	P	Q	R	N	D	S	V	P	T	L	A	Q	M	T	D	K	A	I	E	L	L	S	K	N	E	K	G	F	F	L	Q	V	E	G	A	S	I	D	K	Q	D	H	A	A	N	P	C	G	Q	I	G	E	T	V	D	L	D	E	A	V	Q	R	A	L	E	F	A	K	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	N	F	L	S	A	A	T	D	L	A	I	Q	F	L	S	K	D	N	S	A	F	F	I	M	S	E	G	S	Q	I	D	W	G	G	H	A	N	N	A	S	Y	L	I	S	E	I	N	D	F	D	D	A	I	G	T	A	L	A	F	A	K	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T														T	G	G	G										T	T							T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	N	T	L	V	I	V	T	A	D	H	A	H	A	S	Q	I	V	A	P	D	T	K	A	P	G	L	T	Q	A	L	N	T	K	D	G	A	V	M	V	M	S	Y	G	N	S	E	E	D	S	Q	E	H	T	G	S	Q	L	R	I	A	A	Y	G	P	H	A	A	N	V	V	G	L	T	D	Q	T	D	L
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	G	N	T	L	V	I	V	T	S	D	H	E	T	G	G	F	T	L	A	A	K	S	N	K	S	E	Y	S	D	Y	T	E	I	G	.	.	.	.	.	.	.	.	.	.	.	P	T	F	S	T	G	G	H	S	A	T	L	I	P	V	F	A	Y	G	P	G	S	E	E	F	I	G	I	Y	E	N	N	E	I
Template Known Secondary structure			S	S								S				T	T		B																		.	.	.	.	.	.	.	.	.	.	.		B		S		S	S												S	T	T	G	G	G	G						T	T
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.												.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		440	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	Y	T	M	K	A	A	L	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	H	K	I	L	K	V	T	K	W
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		364	.	.	.	.	.	370	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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