 |
| Job Description | P0AAS9 | | Confidence | 2.90% | Date | Thu Jan 5 11:13:44 GMT 2012 |
| Rank | 64 | Aligned Residues | 28 |
| % Identity | 18% | Template | c2hcnA_ |
| PDB info |
PDB header:transferase | Chain: A: PDB Molecule:rna-directed rna polymerase (ns5); |
PDBTitle: crystal structure of rna dependent rna polymerase domain from west2 nile virus
|
| Resolution | 2.35 Å |
|
| | |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | |
|
| | | | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
A | K | A | G | K | Y | L | G | Q | A | A | K | L | M | I | G | M | P | D | Y | D | N | Y | V | E | H | M | R |
| Query Conservation | |
| | | |
| | | | | | |
| |
| |
| | | |
|
| |
|
|
|
| |
|
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | |
| | | |
| | |
|
| | |
|
| |
| |
| |
|
|
| | |
| |
| Template Sequence | |
A | E | N | I | Q | V | A | I | N | Q | V | R | S | I | I | G | D | E | K | Y | V | D | Y | M | S | S | L | K |
| Template Known Secondary structure | |
| | T | | | | | | | | | | | | |
| S |
|
|
|
|
|
| G | G | G |
|
|
| Template Predicted Secondary structure | |
| | | | | | | | | | | | | | |
|
| | | | | | | | | |
|
|
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
865 | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
