Job Description P30845 Confidence 100.00% Date Thu Jan 5 11:46:29 GMT 2012 Rank 3 Aligned Residues 302 % Identity 17% Template c3lxqB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein vp1736; PDBTitle: the crystal structure of a protein in the alkaline2 phosphatase superfamily from vibrio parahaemolyticus to3 1.95a Resolution 1.95 Å

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		208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
Predicted Secondary structure																																																													.	.
Query SS confidence																																																													.	.
Query Sequence		H	Q	R	L	A	N	L	P	L	V	R	I	G	E	D	A	H	R	N	P	L	M	Q	N	E	K	R	K	N	L	T	I	L	I	V	G	E	T	S	R	A	E	N	F	S	L	N	G	Y	P	R	E	T	N	P	R	L	A	K	.	.	D	N	V	V	Y	F	P	N	T	A	S	C	G	T	A	T	A	V	S
Query Conservation																																																													.	.
Alig confidence																																																		.											.	.
Template Conservation																																																		.
Template Sequence		R	A	S	S	T	K	I	D	F	D	P	T	L	L	P	T	X	N	S	N	P	A	T	Y	Q	G	K	R	K	N	L	V	I	L	L	Q	E	S	L	G	A	Q	F	V	G	S	L	G	.	G	L	P	L	T	P	N	L	D	E	L	X	Q	E	G	W	Q	F	T	Q	X	Y	A	T	G	T	R	S	V	R	G
Template Known Secondary structure								S		B		T	T	T	S	T	T							S			S	S										T	T			G	G	G		G	G	G	T	.	S		S										T	T	S				T	T				S		S	S
Template Predicted Secondary structure																																																		.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.		.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.						.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.								.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
Predicted Secondary structure																					.	.	.	.	.																															.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.																															.	.	.	.	.	.	.
Query Sequence		V	P	C	M	F	S	D	M	P	R	E	H	Y	K	E	E	L	A	Q	.	.	.	.	.	H	Q	E	G	V	L	D	I	I	Q	R	A	G	I	N	V	L	W	N	D	N	D	G	G	C	K	G	A	C	D	.	.	.	.	.	.	.	R	V	P	H	Q	N	V	T	A	L	N	L	P	D	Q	C	I	N	G
Query Conservation																					.	.	.	.	.																															.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.																															.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	E	A	V	T	T	G	F	P	P	S	P	S	R	A	V	V	K	L	S	K	S	Q	T	G	F	F	T	I	A	D	L	L	K	E	Q	G	Y	H	T	Q	F	I	Y	G	G	E	A	N	F	D	N	X	K	T	F	F	F	G	N	G	F	D	Q	I	V	E	E	K	N	Y	T	N	P	G	F	V	G	S	W
Template Known Secondary structure													S	S			T	T	T		G	G	G	S	S	S	B										T	T								S	S		T	T	G	G	G								T	T							G	G	G		S	S		S				T	T
Template Predicted Secondary structure
Template SS confidence
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370				.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430
Predicted Secondary structure																			.	.	.
Query SS confidence																			.	.	.
Query Sequence		E	C	Y	D	E	V	L	F	H	G	L	E	E	Y	I	N	N	.	.	.	L	Q	G	D	G	V	I	V	L	H	T	I	G	S	H	G	P	T	Y	Y	N	R	Y	P	P	Q	F	R	K	F	T	P	T	C	D	T	N	E	I	Q	T	C	T	K	E	Q	L	V	N	T	Y	D	N	T	L	V	Y	V	D	Y
Query Conservation																			.	.	.
Alig confidence																			.	.	.																			.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	V	S	D	E	D	L	Y	N	K	A	D	E	E	F	E	R	L	S	K	G	D	K	P	F	F	S	L	V	F	T	S	S	N	H	S	P	Y	.	.	.	E	Y	P	E	G	K	I	E	Q	Y	D	S	E	H	X	T	.	.	.	.	.	.	.	.	.	.	.	.	.	R	N	N	A	V	K	Y	S	D	Y
Template Known Secondary structure																					T	S	S	S										S	S	S	T	T		.	.	.				T	T	S	S			S	S	S	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.				.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.														470	.	.	.	.	.	.	.	.	.
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	D	K	A	I	N	L	L	K	E	H	Q	D	K	F	T	T	S	L	V	Y	L	S	D	H	G	E	S	L	G	E	N	G	I	Y	L	H	G	L	P	Y	A	I	A	P	D	S	Q	K	Q	V	P	M	L	L	W	L	S	E	D	Y	Q	K	R	Y	Q	V	D	Q	N	C	L	Q	K	Q	A	Q	T	Q
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	G	T	F	F	D	K	A	K	K	S	S	Y	W	D	D	T	I	F	I	V	I	A	D	H	D	A	R	V	F	G	A	.	.	.	.	.	.	.	.	.	N	L	V	P	V	K	H	F	H	I	P	A	L	I	I	G	K	D	.	.	.	.	.	.	.	.	.	.	.	.	I	Q	P	R	K	D	D	R
Template Known Secondary structure											T	T	S	S	S	G	G	G								S			S				S		.	.	.	.	.	.	.	.	.	S	S			G	G	G	T								S	T	T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.										.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530													.	.	.	.	.	.	.	.
		511	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	Y	S	Q	D	N	L	F	S	T	L	L	G	L	T	G	V	E	T	K	Y	Y	Q	A	A	D	D	I	L	Q	T	C	R	R	V	S	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	A	N	N	I	D	X	P	P	T	L	L	S	L	I	G	V	D	A	K	T	P	X	I	G	R	D	L	T	K	P	L	A	R	E	D	E
Template Known Secondary structure					G	G	G										T									S			T	T	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		539	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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