Job Description P30845 Confidence 98.17% Date Thu Jan 5 11:46:29 GMT 2012 Rank 34 Aligned Residues 196 % Identity 15% Template c3e2dB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alkaline phosphatase; PDBTitle: the 1.4 a crystal structure of the large and cold-active2 vibrio sp. alkaline phosphatase Resolution 1.40 Å

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		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.										.	.	.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.				.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.															.	.	.											.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.															.	.	.											.	.	.
Query Sequence		K	R	K	N	L	T	I	L	I	V	G	E	T	S	R	A	E	N	F	S	L	N	.	.	.	.	.	.	.	.	.	G	Y	P	R	E	T	N	P	R	L	A	K	D	N	.	.	.	V	V	Y	F	P	N	T	A	S	C	.	.	.	G	T	A	T	A	V	S	V	P	C	M	F	S	D	M	P	R	E	H
Query Conservation																								.	.	.	.	.	.	.	.	.															.	.	.											.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.															.	.	.											.	.	.
Template Conservation
Template Sequence		A	E	I	K	N	V	I	L	M	I	G	D	G	M	G	P	Q	Q	V	G	L	L	E	T	Y	A	N	Q	A	P	N	S	I	Y	K	G	N	K	T	A	I	Y	Q	L	A	Q	E	G	V	I	G	S	S	L	T	H	P	E	D	A	I	V	V	D	S	A	C	S	A	T	M	L	A	T	G	I	Y	S	S	S
Template Known Secondary structure																															T	T		T	T	T	T												S										T	T	S	S	S													S	S				T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		298	.	300	.	.	.	.				.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.																																	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		Y	K	E	E	L	A	Q	.	.	.	H	Q	E	G	V	L	D	I	I	Q	R	A	G	I	N	V	L	W	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	G	G	C	K	G	A	C	D	R	V	P	.	.	.	.	.
Query Conservation									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence									.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		E	V	I	G	I	D	S	Q	G	N	H	V	E	T	V	L	E	K	A	K	K	A	G	K	A	T	G	L	V	S	D	T	R	L	T	H	A	T	P	A	S	F	A	A	H	Q	P	H	R	S	L	E	N	Q	I	A	S	D	M	L	A	T	G	A	D	V	M	L	S	G	G	L	R	H	W	I	P	K	S	T
Template Known Secondary structure		T		B	S	B		T	T	S		B											T	T											T	T	S					T	T	T			B	S		T	T													T		S							G	G	G	S	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
																																																																			338	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	Q	N	V	T	A	L	N	L	P	D	Q	C	I	N
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	K	G	E	T	Y	K	Q	L	E	K	L	T	Q	G	D	V	Y	L	K	S	K	R	K	D	D	R	N	L	L	T	E	A	E	K	D	G	Y	Q	L	A	F	N	R	N	M	L	D	D	A	K	G	D	K	L	L	G	L	F	A	Y	S	G	M	D	D	G	I	A	Y	S	N	K	K	K	S	G	E	R
Template Known Secondary structure		G	G	T	S										T	T	T		S							S	S											T	T					S	S									S	S							S	S	S	S														T
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	C	Y	D	E	V	L	F	H	G	L	E	E	Y	I	N	N	L	Q	G	D	G	V	I	V	L	H	T	I	G	S	H	G	P	T	Y	Y	N	R	Y	P	P	Q	F	R	K	F	T	P	T	C	D	T	N	E	I	Q	T	C	T	K	E	Q	L	V	N	T	Y	D	N	T	L	V	Y	V	D	Y	I	V
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	Q	P	S	L	K	E	M	T	Q	K	A	L	N	I	L	S	K	D	E	D	G	F	F	L	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	G	G	Q	I	D	W	A	G	H	S	N	D	A	G	T	M	L	H	E	L	L	K	F	D	E	A	I
Template Known Secondary structure			S															T	T		T	T							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S							T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	A	I	N	L	L	K	E	H	Q	D	K	F	T	T	S	L	V	Y	L	S	D	H
Query Conservation
Alig confidence													.	.	.
Template Conservation													.	.	.
Template Sequence		Q	T	V	Y	E	W	A	K	D	R	E	.	.	.	D	T	I	V	I	V	T	A	D	H
Template Known Secondary structure									T	T		S	.	.	.	S
Template Predicted Secondary structure													.	.	.
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions