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Job DescriptionP30845
Confidence99.85%DateThu Jan 5 11:46:29 GMT 2012
Rank18Aligned Residues172
% Identity18%Templatec2i09A_
PDB info PDB header:isomeraseChain: A: PDB Molecule:phosphopentomutase; PDBTitle: crystal structure of putative phosphopentomutase from streptococcus2 mutans
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   304.....310.........320.........330.........340.........350.........360.........370. ........380..
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Query Sequence  QHQEGVLDIIQRAGINVLWNDNDGGCKGACDRVPHQNVTALNLPDQCINGECYDEVLFHGLEEYINNL. QGDGVIVLHTI
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Template Sequence  PFAPTVLNKLADAGVSTYAVG. . . . . . . . . . . . KINDIFNGSGITNDMGHNKSNSHGVDTLIKTMGLSAFTKGFSFTNLV
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   228.230.........240........ .250.........260.........270.........280.........290.....
 
   383......390.........400.........410.........420.........430.........440.........450.........460..
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Query Sequence  GSHGPTYYNRYPPQFRKFTPTCDTNEIQTCTKEQLVNTYDNTLVYVDYIVDKAINLLKEHQDKFTTSLVYLSDHGESLGE
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Template Sequence  DFDALY. . . . . . . . . . . . . . . . . . . . . . . . GHRRNAHGYRDCLHEFDERLPEIIAAMK. . . . . VDDLLLITADHGNDPTY
Template Known Secondary structure  T........................TTTT
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   296...300. ........310.........320......... 330.........340......
 
   463......470.........480.........490.........500.........510.........520.........530.........540
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Query Sequence  NGIYLHGLPYAIAPDSQKQVPMLLWLSEDYQKRYQVDQNCLQKQAQTQHYSQDNLFSTLLGLTGVETKYYQAADDILQ
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Template Sequence  AGTDHTRE. . . . . . . . . . YVPLLAYSPS. . . . . . . . . . . . FTGNGVLPVGHYADISATIADNFGVDTA. . MIGESFLD
Template Known Secondary structure  SSSS
B
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   347..350.... .....360.... .....370.........380.........390.. .......400
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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