 |
Job Description | P25666 | Confidence | 2.94% | Date | Thu Jan 5 11:42:14 GMT 2012 |
Rank | 91 | Aligned Residues | 56 |
% Identity | 21% | Template | d1nowa1 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| beta-N-acetylhexosaminidase catalytic domain
|
Resolution | 2.20 |
|
 |
  |   |
11 | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 60 |
Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
Y | F | D | I | G | R | G | D | W | T | A | N | K | G | F | R | E | K | L | A | R | S | V | D | V | Y | F | S | Y | F | E | R | L | A | A | L | E | N | E | M | I | I | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | T | S | P | D | L | K | P |
Query Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|   |   |   |   |   |   |
|   |   |
|   |
|   |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |
|   |
|
|
|
|
|
|
|
|   |   |   |
|
|
|   |   |   |   |
|   |
|
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |
|
|   |   |
Template Sequence |   |
L | I | D | T | S | R | H | Y | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
P | V | K | I | I | L | K | T | L | D | A | M | A | F | N | K | F | N | V | L | H | W | H | I | V | D | D | Q | S | F | P | Y | Q | S | I | T | F | P | E | L | S | N | K | G | S | Y | S | L | S | H | V | Y | T | P | N | D | V | R | M |
Template Known Secondary structure |   |
 |  |  | S | S | S | S |
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |
|
|
| S | S |
|
|
| B |
|
| S | S |
|  |  |  |  |  |  |  | S | S | S | T | T | S |
| B |
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
206 | . | . | . | 210 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . |
  |
  |   |
61 | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | V | E | A | I | R | N | G | K | P | T | T | V | I | V | I | D | I |
Query Conservation |   |
  |
|   |
|   |
|   |   |   |   |
|   |   |
|
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|   |
|
|   |   |
|
|
|   |
|
|
|
|
|
|   |
Template Sequence |   |
V | I | E | Y | A | R | L | R | G | I | R | V | L | P | E | F | D | T |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
274 | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|