 |
| Job Description | P25666 | | Confidence | 3.36% | Date | Thu Jan 5 11:42:14 GMT 2012 |
| Rank | 68 | Aligned Residues | 77 |
| % Identity | 13% | Template | d1ku1a_ |
| SCOP info | alpha-alpha superhelix
| Sec7 domain
| Sec7 domain
|
| Resolution | 1.93 |
|
| | |
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | |
|
. | . | . | . | . | 240 | . | . | . | . | . | . | |
|
|
. | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | |
|
|
270 | . | . | . | . | . | . | . | . | . |
| Predicted Secondary structure | |
 | | | | | | | | | | | | | | | | | | | |
|
|
|
|
|
| | . | . | | | | | | | | | | |
|
| . | . | . |
|  | | | |  |
|
|
|
|
|
| | | | | | | |
|
|
|
| . | . | . |
| | | | | | | | | |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
Q | H | K | W | K | E | F | Y | K | L | V | L | E | S | Q | K | I | T | L | N | N | N | I | V | D | D | D | . |
. |
Q | G | I | F | V | M | C | Y | Y | K | R | P | . |
. |
. |
D | L | F | N | L | N | Y | L | G | R | G | K | W | F | D | L | F | R | C | F | R | S | N | . |
. |
. |
T | L | G | A | K | M | Q | A | L | R |
| Query Conservation | |
| | | | | |
| | | | | | | | | | |
|
| | |
| |
|
|
|
| . | . |
| |
|
| | | | | | | |
| . | . | . | |
|
|
| | | | | | | | |
|
| | |
| | |
| | | | . | . | . | | | | | | | | | | |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
| Template Conservation | |
| | | | | |
|
| | |
|
| |
|
| | |
| | | | | |
| | | | | | | |
|
| |
|
| | | | | | |
| |
| | |
|
|
|
|
|
| | | |
| | |
|
| | |
| | | |
|
|
| | | | |
|
| |
|
|
|
| Template Sequence | |
I | E | C | T | N | A | F | N | E | K | P | K | K | G | I | P | M | L | I | E | K | G | F | I | A | S | D | S | D | K | D | I | A | E | F | L | F | N | N | N | N | R | M | N | K | K | T | I | G | L | L | L | C | H | P | D | K | V | S | L | L | N | E | Y | I | R | L | F | D | F | S | G | L | R | V | D | E | A | I | R |
| Template Known Secondary structure | |
| | | | | | | | |
| | | | | | | | | | | T | T | S | S | S |
| S | S | | | | | | | | | | | T | T | T | T | S |
| | | | | | | | | T |
| G | G | G | | | | | | | | | | T | S |
|
| T | T |
|
| | | | | | |
| Template Predicted Secondary structure | |
| | | | | | | | |
| | | | | | | | | | |
|
|
|
|
|
|
|
| | | | | | | | | | |
|
|
|
|
|
| | | | | | | | |
|
|
|
| | | | | | | | | | | |
|
|
|
|
|
|
| | | | | | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
564 | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . |
| |
| | |
280 | . | . | . | . |
| Predicted Secondary structure | |
| | |
|
|
| Query SS confidence | |
|
|
|
|
|
| Query Sequence | |
I | F | L | S | R |
| Query Conservation | |
| | | | |
| Alig confidence | |
|
|
|
|
|
| Template Conservation | |
|
|
| | |
| Template Sequence | |
I | L | L | T | K |
| Template Known Secondary structure | |
| | T | T | T |
| Template Predicted Secondary structure | |
| | | | |
| Template SS confidence | |
|
|
|
|
|
| | |
644 | . | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
