Job Description P25666 Confidence 3.34% Date Thu Jan 5 11:42:14 GMT 2012 Rank 69 Aligned Residues 71 % Identity 17% Template c3h0gE_ PDB info PDB header:transcription Chain: E: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe Resolution 3.65 Å

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		50	.	.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.			.	.	.	.	.	.	.	.	120
Predicted Secondary structure									.	.	.	.	.	.																																																								.	.
Query SS confidence									.	.	.	.	.	.																																																								.	.
Query Sequence		M	I	I	F	T	S	P	.	.	.	.	.	.	D	L	K	P	R	V	E	A	I	R	N	G	K	P	T	T	V	I	V	I	D	I	K	K	K	F	R	Y	I	R	S	R	I	E	K	I	Q	K	D	E	S	F	T	N	R	L	E	P	R	Q	L	K	N	P	E	.	.	Y	W	S	P	E	Y	V	L	V
Query Conservation									.	.	.	.	.	.																																																								.	.
Alig confidence									.	.	.	.	.	.																																																								.	.
Template Conservation
Template Sequence		Y	I	E	F	A	K	E	P	S	V	G	I	K	E	M	R	T	F	V	H	T	L	G	D	H	N	H	K	T	G	I	L	I	Y	A	N	S	M	T	P	S	A	A	K	I	I	A	T	V	T	G	Q	F	T	I	E	T	F	Q	E	S	D	L	I	V	N	I	T	H	H	E	L	V	P	K	H	I	L	L
Template Known Secondary structure								S	S	S			T	T	T	T	G	G	G	T						T	T		S							S	S				S					T	T	T	T	T		T	T								S	S	S	S		S		T	T	S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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