Job Description P25522 Confidence 99.17% Date Thu Jan 5 11:41:55 GMT 2012 Rank 247 Aligned Residues 143 % Identity 22% Template c3snhA_ PDB info PDB header:endocytosis Chain: A: PDB Molecule:dynamin-1; PDBTitle: crystal structure of nucleotide-free human dynamin1 Resolution 3.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210			.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																				.	.																																																								.	.	.	.	.
Query SS confidence																				.	.																																																								.	.	.	.	.
Query Sequence		L	N	D	V	I	A	D	L	D	A	V	R	A	E	A	R	Q	G	.	.	S	L	L	R	E	G	M	K	V	V	I	A	G	R	P	N	A	G	K	S	S	L	L	N	A	L	A	G	R	E	A	A	I	V	T	D	I	A	G	T	T	R	D	V	L	R	E	H	I	H	I	D	G	M	P	.	.	.	.	.
Query Conservation																				.	.																																																								.	.	.	.	.
Alig confidence																				.	.																																					.	.		.																.	.	.	.	.
Template Conservation																																																										.	.		.
Template Sequence		M	E	D	L	I	P	L	V	N	R	L	Q	D	A	F	S	A	I	G	Q	N	A	D	L	D	L	P	Q	I	A	V	V	G	G	Q	S	A	G	K	S	S	V	L	E	N	F	V	G	R	D	F	L	P	R	G	S	.	.	G	.	T	R	R	P	L	V	L	Q	L	V	N	A	T	T	E	Y	A	E	F	L
Template Known Secondary structure			T	T														T	T	T			S	S	S											T	T												T	S			S		S	S		.	.		.			S										S	S						T
Template Predicted Secondary structure																																																										.	.		.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																														266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.		.	.	300
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	I	I	D	T	A	G	L	R	E	A	S	D	E	V	E	R	I	G	I	E	R	A	W	Q	E	I	E	Q	A	D	.	R	V	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.																			.
Template Conservation																																																										.	.
Template Sequence		H	C	K	G	K	K	F	T	D	F	E	E	V	R	L	E	I	E	A	E	T	D	R	V	T	K	G	I	S	P	V	P	I	N	L	R	V	Y	S	P	H	V	L	N	L	T	L	V	D	L	P	G	M	T	K	P	.	.	D	I	E	F	Q	I	R	D	M	L	M	Q	F	V	T	K	E	N	C	L	I	L
Template Known Secondary structure		T	T		S			B																	T						S										S	S	S		S													.	.																S	T	T
Template Predicted Secondary structure																																																										.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140			.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	V	D	G	T	T	T	D	A	V	D	P	A	E	I	W	P	E	F	I	A	R	L	P	A	K	L	P	I	T	V	V	R	N	K	A	D	I	T	G	E
Query Conservation
Alig confidence																.	.
Template Conservation																.	.
Template Sequence		A	V	S	P	A	N	S	D	L	A	N	S	D	A	.	.	L	K	V	A	K	E	V	D	P	Q	G	Q	R	T	I	G	V	I	T	K	L	D	L	M	D	E
Template Known Secondary structure						T	T	S		S	T	T				.	.									S	S	S	S	S								S	T	T	S		T
Template Predicted Secondary structure																.	.
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.			.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions