247 c3snhA_ Probab=99.17   E-value=2.2e-09  Score=83.46  Aligned_columns=143  Identities=22%

Q ss_pred             HHHHHHHHHHHHHHHHHH--HHHHCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCEE-----
Q ss_conf             999999999999999987--8631287799983987999899999856874330576877322069999989989-----
Q batch____       193 LNDVIADLDAVRAEARQG--SLLREGMKVVIAGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMP-----  265 (454)
Q Consensus       193 i~~i~~~l~~ll~~~~~~--~~l~~gi~I~ivG~pnaGKSSLiN~L~~~~~a~Vs~~~gtT~d~~~~~~~~~g~~-----  265 (454)
                      |+.++.-+++|.+.....  ...-+-++||+||.-++||||++.+|+|.+..+.+.  | ||-+++-.+.....+     
T Consensus         1 m~~Li~~in~LqD~l~~lG~~~~i~LPqiVVvG~QSsGKSSvlEai~g~~flprg~--~-TR~p~~i~l~~~~~~~~~~~   77 (652)
T c3snhA_           1 MEDLIPLVNRLQDAFSAIGQNADLDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGS--G-TRRPLVLQLVNATTEYAEFL   77 (652)
T ss_dssp             CTTHHHHHHHHHHHHHTTTCCSSSCCCEEEEEECTTCCHHHHHHHHHTSCCSCSSC--C-CCSCEEEEEEECSSCEEECT
T ss_pred             CCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHHHHHHHCCCCCCCCC--C-CCCCEEEEEEECCCCCEEEE
T ss_conf             90179899999999987299987889818998889887999988761874277999--7-12648999985798607898


Q ss_pred             --------------------------------------------EEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC-EEE
Q ss_conf             --------------------------------------------99997588356640588999999999885389-899
Q batch____       266 --------------------------------------------LHIIDTAGLREASDEVERIGIERAWQEIEQAD-RVL  300 (454)
Q Consensus       266 --------------------------------------------i~l~DTpG~~~~~~~~e~~~~~~~~~~~~~aD-lil  300 (454)
                                                                  ++|+|+||+...  ..+..-..+...++.+.+ +||
T Consensus        78 ~~~~~~~~d~~~i~~~i~~~~~~~~~~~s~~~i~l~i~~p~~~~LtlvDLPGl~~~--~~~~~i~~lv~~yi~~~~~IIL  155 (652)
T c3snhA_          78 HCKGKKFTDFEEVRLEIEAETDRVTKGISPVPINLRVYSPHVLNLTLVDLPGMTKP--DIEFQIRDMLMQFVTKENCLIL  155 (652)
T ss_dssp             TTCSCCBCCHHHHHHHHHHHHHHTCCCCCSCCCCCEEEESSSCSEEEEECCCCCCC--HHHHHHHHHHHHHHHSTTEEEE
T ss_pred             ECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCEEEEECCCCCCC--CHHHHHHHHHHHHHCCCCEEEE
T ss_conf             63875428989999999999876414778672799995089764178767898757--8478999999998269881999


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCH
Q ss_conf             998489858988899889988752028968999876777885
Q batch____       301 FMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITGE  342 (454)
Q Consensus       301 ~VvDas~~~~~~~~~~~~~~~~~~~~~~piIiV~NK~Dl~~~  342 (454)
                      +|++++......+.  +....+....+.+.|.|+||.|++++
T Consensus       156 aV~~a~~D~ans~~--l~lar~~Dp~g~RTiGVlTK~Dl~~~  195 (652)
T c3snhA_         156 AVSPANSDLANSDA--LKVAKEVDPQGQRTIGVITKLDLMDE  195 (652)
T ss_dssp             EEEETTSCSTTCHH--HHHHHHHCSSSSSCCCEEECSTTSCT
T ss_pred             EEEECCCCHHHHHH--HHHHHHHCCCCCCEEEEECCCCCCCC
T ss_conf             99627898766589--99999719788815998415012766