 |
Job Description | P0AFI2 | Confidence | 14.42% | Date | Thu Jan 5 11:26:24 GMT 2012 |
Rank | 91 | Aligned Residues | 53 |
% Identity | 11% | Template | d1y0ua_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| "Winged helix" DNA-binding domain
| ArsR-like transcriptional regulators
|
Resolution | 1.60 |
|
  |   |
367 | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | |
|
. | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | K | V | L | K | R | L | H | I | L | E | G | L | L | V | A | F | L | N | . |
. |
I | D | E | V | I | E | I | I | R | N | E | D | E | P | K | P | A | L | M | S | R | F | G | L | T | E | T | Q | A | E | A | I | L | E | L |
Query Conservation |   |
  |
|   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   | . | . |
|
|   |
|
|   |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |
|
|   |
|   |   |
|
|
|
|
|
|
|
|
|
|
|
|   |
|   |
|   |
| . |
|   |   |
|
|   |   |
|
|   |
|
|
|   |
|
|   |
|
|
|
|   |
Template Sequence |   |
D | S | L | E | K | A | D | E | Y | H | K | R | Y | N | Y | A | V | T | N | P | V | R | R | K | I | L | R | X | L | D | K | G | R | . |
S | E | E | E | I | X | Q | T | L | S | L | S | K | K | Q | L | D | Y | H | L | K | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T |
| . |
|  |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|