Job Description P0AFI2 Confidence 100.00% Date Thu Jan 5 11:26:24 GMT 2012 Rank 18 Aligned Residues 236 % Identity 16% Template d1suua_ SCOP info 6-bladed beta-propeller GyrA/ParC C-terminal domain-like GyrA/ParC C-terminal domain-like Resolution 1.75

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		498	.	500	.	.	.	.	.	.	.	.	.	510	.	.									.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.
Query Sequence		E	P	V	T	I	V	L	S	Q	M	G	W	V	R	S	.	.	.	.	.	.	.	.	A	K	G	H	D	I	D	A	P	G	L	N	Y	K	A	G	D	S	F	K	A	A	V	K	G	K	S	N	Q	P	V	V	F	V	D	S	T	G	R	S	Y	A	I	D	P	I	T	L	P	S	A	R	G	Q	G	E	P
Query Conservation																	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.																																																		.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		E	N	I	V	V	M	L	T	K	K	G	F	L	K	R	L	S	Q	N	E	Y	K	L	Q	G	T	G	G	K	G	L	S	S	F	D	L	N	D	G	D	E	I	V	I	A	L	C	V	N	T	H	D	Y	L	F	M	I	S	N	E	G	K	L	Y	L	I	N	A	Y	E	I	K	.	.	.	.	.	D	Q	N
Template Known Secondary structure										T	T		B						G	G	G	S		B			S	S											T	T											T	T								T	T	S							G	G	G	S		.	.	.	.	.			B
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.						.	.	580
		570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590				.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.
Query SS confidence																							.	.	.
Query Sequence		L	T	G	K	L	T	L	P	P	G	A	T	V	D	H	M	L	M	E	S	D	.	.	.	D	Q	K	L	L	M	A	S	D	A	G	Y	G	F	V	C	T	F	N	D	L	V	A	R	N	R	A	G	K	A	L	I	T	L	P	E	N	A	H	V	M	P	P	V	V	I	E	D	A	S	D	M	L	L	A	I
Query Conservation																							.	.	.
Alig confidence																							.	.	.																						.	.	.	.																							.
Template Conservation																																															.	.	.	.																							.
Template Sequence		I	S	E	L	I	N	L	G	D	Q	E	E	I	L	T	I	K	N	S	K	D	L	T	D	D	A	Y	L	L	L	T	T	A	S	G	K	I	A	R	F	E	S	T	D	F	.	.	.	.	K	A	G	V	I	V	I	K	L	N	D	K	D	F	V	T	S	A	E	I	V	F	.	K	D	E	K	V	I	C	L
Template Known Secondary structure		G	G	G	T	S				T	T										S				T	T								T	T	S							G	G	G	G	.	.	.	.							B				T	T											.	T	T
Template Predicted Secondary structure																																															.	.	.	.																							.
Template SS confidence
		588	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.					.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.		.	.	.	.	.	660	.	.
		647	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.		.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.
Predicted Secondary structure																					.
Query SS confidence																					.
Query Sequence		T	Q	A	G	R	M	L	M	F	P	V	S	D	L	P	Q	L	S	K	.	G	K	G	N	K	I	I	N	I	P	S	A	E	A	A	R	G	E	D	G	L	A	Q	L	Y	V	L	P	P	Q	S	T	L	T	I	H	V	G	K	R	K	I	K	L	R	P	E	E	L	Q	K	V	T	G	E	R	G	R	R	G
Query Conservation																					.
Alig confidence																					.															.	.	.	.	.	.																																		.
Template Conservation																																				.	.	.	.	.	.																																		.
Template Sequence		S	K	K	G	S	A	F	I	F	N	S	R	D	V	R	L	T	N	R	G	T	Q	G	V	C	G	M	K	L	K	E	G	D	L	.	.	.	.	.	.	F	V	K	V	L	S	V	K	E	N	P	Y	L	L	I	V	S	E	N	G	Y	G	K	R	L	N	M	S	K	I	S	E	L	.	K	R	G	A	T	G
Template Known Secondary structure			T	T	S							G	G	G	S		B			T	T	B										T	T			.	.	.	.	.	.								T	T		S							T	T	S							G	G	G	S		B		.		T	T
Template Predicted Secondary structure																																				.	.	.	.	.	.																																		.
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700							.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.		.	.	.	.	.	.
		726	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	M	R	G	L	Q	R	I	D	R	V	E	I	D	S	P	R	R	A	S	S	G	D	S	E
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		Y	T	S	Y	K	K	.	S	D	K	K	A	G	S	V	V	D	A	I	A	V	S	E	D	D	E
Template Known Secondary structure					S		T	.	T		T	T	T		S									T	T
Template Predicted Secondary structure								.
Template SS confidence
		740	.	.	.	.	.		.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions