Job Description P0AFI2 Confidence 13.76% Date Thu Jan 5 11:26:24 GMT 2012 Rank 98 Aligned Residues 119 % Identity 18% Template d1mi8a_ SCOP info Hedgehog/intein (Hint) domain Hedgehog/intein (Hint) domain Intein (protein splicing domain) Resolution 2.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		537	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.		.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence		G	K	S	N	Q	P	V	V	F	V	D	S	T	G	R	S	Y	A	I	D	P	I	T	L	P	S	A	R	G	Q	G	E	P	L	T	G	K	L	T	.	L	P	P	G	A	T	V	D	H	M	L	M	E	S	D	D	Q	K	L	L	M	A	S	D	A	G	Y	G	F	V	C	T	F	N	D	L	V	A	R	N
Query Conservation																																									.
Alig confidence																	.	.																							.
Template Conservation																	.	.
Template Sequence		A	I	S	G	D	S	L	I	S	L	A	S	T	G	K	.	.	R	V	S	I	K	D	L	L	D	E	K	D	F	E	I	W	A	I	N	E	Q	T	M	K	L	E	S	A	K	V	S	R	V	F	M	T	G	K	K	L	V	Y	I	L	K	T	R	L	G	R	T	I	K	A	T	A	N	H	R	F	L	T	I
Template Known Secondary structure					T	T						T	T	T	T		.	.				S	G	G	G	T	T			S								T	T	T	T																								T	T								T	T						T
Template Predicted Secondary structure																	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.			.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	K	A	L	I	T	L	P	E	N	A	H	V	M	P	P	V	V	I	E	D	A	S	D	M	L	L	A	I	T	Q	A	G	R	M	L	M	F	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	G	W	K	R	L	D	E	L	S	L	K	E	H	I	A	L	P	R	K	S	D	I	S	W	D	S	I	V	S	I	T	E	T	G	V	E	E	V	F	D	L
Template Known Secondary structure		T					G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions