Job Description P0AFI2 Confidence 21.89% Date Thu Jan 5 11:26:24 GMT 2012 Rank 56 Aligned Residues 79 % Identity 13% Template c3lssA_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: trypanosoma brucei seryl-trna synthetase in complex with atp Resolution 1.95 Å

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		390	.	.	.	.	.	.	.			.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.		.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.
Predicted Secondary structure										.	.																										.
Query SS confidence										.	.																										.
Query Sequence		I	E	I	I	R	N	E	D	.	.	E	P	K	P	A	L	M	S	R	F	G	L	T	E	T	Q	A	E	A	I	L	E	L	K	L	.	R	H	L	A	K	L	E	E	M	K	I	R	G	E	Q	S	E	L	E	K	E	R	D	Q	L	Q	G	I	L	A	S	E	R	K	M	N	N	L	L	K	K	E	L	Q
Query Conservation										.	.																										.
Alig confidence										.	.																										.																												.	.	.
Template Conservation																																																																	.	.	.
Template Sequence		I	Q	L	F	R	D	E	T	G	A	N	I	I	R	E	S	Q	R	R	R	F	A	D	P	D	I	V	D	A	I	I	E	A	D	K	K	W	R	R	T	Q	F	L	T	E	A	S	K	K	L	I	N	I	C	S	K	A	V	G	A	K	K	K	.	.	.	A	K	E	A	C	V	L	Q	L	K	Q	L	S	K
Template Known Secondary structure		G	G	G	G	G	S														T	T			T	T																																							.	.	.	T	T
Template Predicted Secondary structure																																																																	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.
		467	.	.	470	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	A	Q	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	S	D	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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