Job Description P0AFI2 Confidence 22.07% Date Thu Jan 5 11:26:24 GMT 2012 Rank 54 Aligned Residues 195 % Identity 13% Template c3dm0A_ PDB info PDB header:sugar binding protein,signaling protein Chain: A: PDB Molecule:maltose-binding periplasmic protein fused with PDBTitle: maltose binding protein fusion with rack1 from a. thaliana Resolution 2.40 Å

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		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	M	L	P	S	E	P	V	T	I	V	L	S	Q	M	G	W	V	R	S	A	K	G	H	D	I	D	A	P	G	L	N	Y	K	A	G	D	S	F	K	A	A	V	K	G	K	S	N	Q	P	V	V	F	V	D	S	T	G	R	S	Y	A	I	D	P	I	T	L	P	S	A	R	G	Q	G	E	P	L	T	G
Query Conservation
Alig confidence																																																												.	.	.								.
Template Conservation																																																												.	.	.								.
Template Sequence		V	L	S	S	D	G	Q	F	A	L	S	G	S	W	D	G	E	L	R	L	W	D	L	A	A	G	V	S	T	R	R	F	V	G	H	T	K	D	V	L	S	V	A	F	S	L	D	N	R	Q	I	V	S	A	S	R	D	R	.	.	.	T	I	K	L	W	N	T	.	L	G	E	C	K	Y	T	I	S	E	G
Template Known Secondary structure					T	T	S	S							T	T	S							T	T	T	T										S	S									T	T	S	S							T	T	S	.	.	.							T	.	T	S								S	S
Template Predicted Secondary structure																																																												.	.	.								.
Template SS confidence
		1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.	.	.	.	.	.	.				.	.	1130	.	.	.	.		.	.	.	.	.	1140	.	.	.	.	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	T	L	P	P	G	A	T	V	D	H	M	L	M	E	S	D	D	Q	K	L	L	M	A	S	D	A	G	Y	G	F	V	C	T	F	N	D	L	V	A	R	N	R	A	G	K	A	L	I	T	L	P	E	N	A	H	V	M	P	P	V	V	I	E	D	A	S	D	M	L	L	A	I	T	Q	A	G	R	M
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		G	E	G	H	R	D	W	V	S	C	V	R	F	S	P	N	T	L	Q	P	T	I	V	S	A	S	W	D	K	T	V	K	V	W	N	L	.	.	.	.	.	.	.	S	N	C	K	L	R	S	T	L	A	G	H	T	G	Y	V	S	T	V	A	V	S	P	D	G	S	L	C	A	S	G	G	K	D	G	V	V
Template Known Secondary structure		T	T	S		S	S									S		S	S	S								T	T	S							T	.	.	.	.	.	.	.	T	T											S	S									T	T	S	S							T	T	S	B
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		1146	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.								.	.	.	.	.	.	.	.	1190	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.
		653	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	F	P	V	S	D	L	P	Q	L	S	K	G	K	G	N	K	I	I	N	I	P	S	A	E	A	A	R	G	E	D	G	L	A	Q	L	Y	V	L	P	P	Q	S	T	L	T	I	H	V	G	K	R	K	I	K	L	R	P	E	E
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	L	W	D	L	A	E	G	K	K	L	Y	S	L	E	A	N	S	V	I	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	L	C	F	S	P	N	R	Y	W	L	C	A	A	T	E	H	G	I	K	I	W	D	L	E
Template Known Secondary structure						T	T	T	T							B		S	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	S							T	T							T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1219	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.																1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions