Job Description P0AFI2 Confidence 21.92% Date Thu Jan 5 11:26:24 GMT 2012 Rank 55 Aligned Residues 68 % Identity 13% Template c3afcB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:semaphorin-6a; PDBTitle: mouse semaphorin 6a extracellular domain Resolution 2.50 Å

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		538	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.											.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		K	S	N	Q	P	V	V	F	V	D	S	T	G	R	S	Y	A	I	D	P	I	T	L	P	S	A	R	G	Q	G	E	P	L	T	G	K	L	T	L	P	P	.	.	.	.	.	.	.	.	.	.	G	A	T	V	D	H	M	L	M	E	S	D	D	Q	K	L	L	M	A	S	D	A	G	Y	G	F	V
Query Conservation																																											.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	N	H	T	V	V	F	L	G	S	E	K	G	I	I	L	K	F	L	A	R	I	G	S	S	G	F	L	N	G	S	L	F	L	E	E	M	N	V	Y	N	P	E	K	C	S	Y	D	G	V	E	D	K	R	I	M	G	M	Q	L	D	R	A	S	G	S	L	Y	V	A	F	S	T	C	V	I	K	V
Template Known Secondary structure		T										T	T	S							S			G	G	G				S																		B	T	T	B												T	T	T	T							S	S
Template Predicted Secondary structure
Template SS confidence
		433	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions