Job Description P0AFI2 Confidence 40.42% Date Thu Jan 5 11:26:24 GMT 2012 Rank 29 Aligned Residues 195 % Identity 11% Template c2oajA_ PDB info PDB header:endocytosis/exocytosis Chain: A: PDB Molecule:protein sni1; PDBTitle: crystal structure of sro7 from s. cerevisiae Resolution 2.40 Å

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		496	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	S	E	P	V	T	I	V	L	S	Q	M	G	W	V	R	S	A	K	G	H	D	I	D	A	P	G	L	N	Y	K	A	G	D	S	F	K	A	A	V	K	G	K	S	N	Q	P	V	V	F	V	D	S	T	G	R	S	Y	A	I	D	P	I	T	L	P	S	A	R	G	Q	G	E	P	L	T	G	K	L	T
Query Conservation
Alig confidence																												.																		.											.	.	.												.	.	.	.	.
Template Conservation																												.																		.											.	.	.												.	.	.	.	.
Template Sequence		F	T	Q	N	L	L	A	I	A	T	V	T	G	E	V	H	I	Y	G	Q	Q	Q	V	E	V	V	.	I	K	L	E	D	R	S	A	I	K	E	M	R	F	V	K	G	.	I	Y	L	V	V	I	N	A	K	D	.	.	.	T	V	Y	V	L	S	L	Y	S	Q	K	.	.	.	.	.	V	L	T	T	V	F
Template Known Secondary structure		T	T	T	T							T	T	S							S	T	T					.				S	S											T	T	.	T							T	T		.	.	.							T	T	T		S	.	.	.	.	.
Template Predicted Secondary structure																												.																		.											.	.	.												.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.				140	.	.	.	.	.	.	.	.	.	150						.	.	.	.	.	.
		576	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.																	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	P	G	A	T	V	D	H	M	L	M	E	S	D	D	Q	K	L	L	M	A	S	D	A	G	Y	G	F	V	C	T	F	N	D	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	N	R	A	G	K	A	L	I	T	L	P	E	N	A	H	V	M	P	P	V	V	I	E	D	A
Query Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.
Template Conservation						.	.																																																																.	.
Template Sequence		V	P	G	K	.	.	I	T	S	I	D	T	D	A	S	L	D	W	M	L	I	G	L	Q	N	G	S	M	I	V	Y	D	I	D	R	D	Q	L	S	S	F	K	L	D	N	L	Q	K	S	S	F	F	P	A	A	R	L	S	P	I	V	S	I	Q	W	N	P	R	D	.	.	I	G	T	V	L	I	S	Y	E
Template Known Secondary structure			S	S		.	.								T	T		S							T	T	S							T	T	T	T															T		S	S	S												T	T		.	.									S
Template Predicted Secondary structure						.	.																																																																.	.
Template SS confidence
		157	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.
		640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	D	M	L	L	A	I	T	Q	A	G	R	M	L	M	F	P	V	S	D	L	P	Q	L	S	K	G	K	G	N	K	I	I	N	I	P	S	A	E	A	A	R	G	E	D	G	L	A	Q	L	Y	V	L	P	P	Q	S	T	L	T	I	H	V	G	K	R	K	I	K	L
Query Conservation
Alig confidence																																								.	.	.	.	.
Template Conservation																																								.	.	.	.	.
Template Sequence		Y	V	T	L	T	Y	S	L	V	E	N	E	I	K	Q	S	F	I	Y	E	L	P	P	F	A	P	G	G	D	F	S	E	K	T	N	E	K	R	.	.	.	.	.	T	P	K	V	I	Q	S	L	Y	H	P	N	S	L	H	I	I	T	I	H	E	D	N	S	L	V	F
Template Known Secondary structure		S							T	T	T	T										B		T	T				S	T	T				T	T	S		B	.	.	.	.	.											T	T	S	S							T	T
Template Predicted Secondary structure																																								.	.	.	.	.
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270						.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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