Job Description P0AFI2 Confidence 18.91% Date Thu Jan 5 11:26:24 GMT 2012 Rank 70 Aligned Residues 112 % Identity 10% Template c2jesG_ PDB info PDB header:viral protein Chain: G: PDB Molecule:portal protein; PDBTitle: portal protein from bacteriophage spp1 Resolution 3.4 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.								140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.
Query Sequence		S	A	C	Y	E	A	M	V	L	M	A	Q	P	F	S	Y	R	Y	P	L	V	D	G	Q	G	N	W	G	A	P	D	D	P	K	S	F	A	A	M	R	Y	T	E	S	R	L	S	K	Y	S	E	L	L	L	S	E	L	G	Q	G	.	.	.	.	.	.	.	T	A	D	W	V	P	N	F	D	G	T	L	Q
Query Conservation																																																														.	.	.	.	.	.	.
Alig confidence																								.	.					.	.	.																														.	.	.	.	.	.	.													.
Template Conservation																								.	.					.	.	.																																																	.
Template Sequence		A	K	E	L	E	R	I	Q	D	E	L	Y	K	S	A	Q	A	V	D	N	S	P	.	.	E	T	I	G	.	.	.	G	G	A	T	G	P	A	L	E	K	L	Y	A	L	L	D	L	K	A	N	M	A	E	R	K	I	R	A	G	L	R	L	F	F	W	F	F	A	E	Y	L	R	N	T	G	K	G	D	.
Template Known Secondary structure																T	T					S		.	.		S	S	T	.	.	.	T	T	T	S																																								T	T	S			.
Template Predicted Secondary structure																								.	.					.	.	.																																																	.
Template SS confidence
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.			.	.	.	.				.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	K	M	L	P	A	R	L	P	N	I	L	L	N	G	T	T	G	I	A	V	G	M	A	T	D	I	P	P	H	N	L	R	E	V	A	Q	A	A	I	A	L	I	D	Q	P	K	T	T	L	D	Q	L	L	D	I	V	Q
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	F	N	P	D	K	E	L	T	M	T	F	T	R	T	R	I	.	Q	N	D	S	E	I	V	Q	S	L	V	Q	G	V	T	G	G	I	M	S	K	E	T	A	V	A	R	N	P
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	.																	T	S	S										T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template SS confidence
															404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions