Job Description P0AFI2 Confidence 18.17% Date Thu Jan 5 11:26:24 GMT 2012 Rank 72 Aligned Residues 148 % Identity 14% Template c1tvfA_ PDB info PDB header:penicillin binding Chain: A: PDB Molecule:penicillin binding protein 4; PDBTitle: crystal structure of penicillin-binding protein 4 (pbp4)2 from staphylococcus aureus Resolution 2.00 Å

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		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		N	Y	S	M	Y	V	I	M	D	R	A	L	P	F	I	G	D	G	L	K	P	V	Q	R	R	I	V	Y	A	M	S	E	L	G	L	N	A	S	A	K	F	K	K	S	A	R	T	V	G	D	V	L	G	K	Y	H	P	H	G	D	S	A	C	Y	E	A	M	V	L	M	A	Q	P	F	.	S	Y	R	Y	P
Query Conservation																																																																												.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.																																		.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	Y	I	M	S	T	L	P	E	L	S	N	T	K	L	Y	P	G	Q	V	W	T	I	A	D	L	L	Q	I	T	V	.	.	.	.	.	.	.	.	.	.	S	N	S	S	N	A	A	A	L	I	L	A	K	K	V	S	K	N	T	S	D	F	V	D	L	M	N	N	K	A	K	A	I	G	M	K	N	T	H
Template Known Secondary structure						T	T		T	T	S							T	T														.	.	.	.	.	.	.	.	.	.		S														S	S	S															T	T		T	T		B
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.											.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		99	100	.	.	.	.						.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.						.	.	.
Predicted Secondary structure								.	.	.	.	.																					.																																									.	.	.	.	.
Query SS confidence								.	.	.	.	.																					.																																									.	.	.	.	.
Query Sequence		L	V	D	G	Q	G	.	.	.	.	.	N	W	G	A	P	D	D	P	K	S	F	A	A	M	R	Y	T	E	S	R	.	L	S	K	Y	S	E	L	L	L	S	E	L	G	Q	G	T	A	D	W	V	P	N	F	D	G	T	L	Q	E	P	K	M	L	P	A	R	L	P	N	I	.	.	.	.	.	L	L	N
Query Conservation								.	.	.	.	.																					.																																									.	.	.	.	.
Alig confidence								.	.	.	.	.																					.												.											.																		.	.	.	.	.
Template Conservation																																													.											.
Template Sequence		F	V	N	P	T	G	A	E	N	S	R	L	R	S	F	A	P	T	K	Y	K	D	Q	E	R	T	V	T	T	A	R	D	Y	A	I	L	D	L	H	V	I	K	E	.	T	P	K	I	L	D	F	T	K	Q	.	L	A	P	T	T	H	A	V	T	Y	Y	T	F	N	F	S	L	E	G	A	K	M	S	L	P
Template Known Secondary structure			S	S	S	S	S	S						G	G	G	S		G	G	G	T	T					B	B																.		T	T						T		.	S	S				T	T								T	T	S	T	T	S	T	T			T
Template Predicted Secondary structure																																													.											.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.		.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	T	G	I	A	V	G	M	A	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	T	D	G	L	K	T	G	S	S	D	T
Template Known Secondary structure		T										T	T
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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